Miyakogusa Predicted Gene

Lj5g3v0875710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0875710.1 tr|Q8H2U6|Q8H2U6_ORYSJ Os07g0661700 protein
OS=Oryza sativa subsp. japonica GN=P0453E03.109 PE=4
SV=,52.81,0.00000000000001,coiled-coil,NULL,CUFF.54141.1
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72735                                                      684   0.0  
gnl|LJGI|BW599827 similar to UniRef100_UPI00015DF96A Cluster: Ub...   127   5e-29

>gnl|LJGI|TC72735 
          Length = 486

 Score =  684 bits (345), Expect = 0.0
 Identities = 345/345 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtggagtccgtaaaactatgcgacctggaactcaccttaaagcccttctatcagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15  atggtggagtccgtaaaactatgcgacctggaactcaccttaaagcccttctatcagaga 74

                                                                       
Query: 61  gcttcagaagcagaggaccgcttatcaaggcttgaagctgcttttaacagtaggaaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  gcttcagaagcagaggaccgcttatcaaggcttgaagctgcttttaacagtaggaaagat 134

                                                                       
Query: 121 actggaaatgaggaagaatctaaagtgattaatgatcttcaatcaaagctaaaagatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 actggaaatgaggaagaatctaaagtgattaatgatcttcaatcaaagctaaaagatgct 194

                                                                       
Query: 181 aatgcagagttaatttcagaaaaagagaaggttcagatgcttgctgcagaaaatgagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aatgcagagttaatttcagaaaaagagaaggttcagatgcttgctgcagaaaatgagaaa 254

                                                                       
Query: 241 cttcaaaatcgtattattcatcttgtccgagcactcaaggatgctgatctgaagttagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cttcaaaatcgtattattcatcttgtccgagcactcaaggatgctgatctgaagttagag 314

                                                        
Query: 301 caagtttcggcaggggagcagctggagagcttgaaattgtagggt 345
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caagtttcggcaggggagcagctggagagcttgaaattgtagggt 359


>gnl|LJGI|BW599827 similar to UniRef100_UPI00015DF96A Cluster: Ubiquitin.; n=1; Homo
           sapiens|Rep: Ubiquitin. - Homo sapiens, partial (14%)
          Length = 429

 Score =  127 bits (64), Expect = 5e-29
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                       
Query: 262 cttgtccgagcactcaaggatgctgatctgaagttagagcaagtttcggcaggggagcag 321
           ||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||| 
Sbjct: 281 cttgtccgagcacgcgaggatgctgatctgaatttagagcaagtttcggcaagggagcat 340

                                   
Query: 322 ctggagagcttgaaattgtagggt 345
           ||||||||||||||||||||||||
Sbjct: 341 ctggagagcttgaaattgtagggt 364