Miyakogusa Predicted Gene

Lj5g3v0868360.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0868360.1 Non Chatacterized Hit- tr|I1JGD6|I1JGD6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.6,0,WD40,WD40
repeat; PRP4,Pre-mRNA processing factor 4 (PRP4)-like; no
description,WD40/YVTN repeat-lik,CUFF.54088.1
         (1713 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73610 homologue to UniRef100_A7PVR8 Cluster: Chromoso...   948   0.0  
gnl|LJGI|FS357678 homologue to UniRef100_A7PVR8 Cluster: Chromos...   876   0.0  

>gnl|LJGI|TC73610 homologue to UniRef100_A7PVR8 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 793

 Score =  948 bits (478), Expect = 0.0
 Identities = 478/478 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagtggagcaggaaaatacctcagcagaacccactgtaacagcctctgatgtttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atggaagtggagcaggaaaatacctcagcagaacccactgtaacagcctctgatgtttca 375

                                                                       
Query: 61  tctgatcattcagctttgcccctgccagtacaacctgttattgtaccagttattactcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctgatcattcagctttgcccctgccagtacaacctgttattgtaccagttattactcct 435

                                                                       
Query: 121 tctgttgtaccccctcttgctcctattccctcaattcctccctctctgggtatccgccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tctgttgtaccccctcttgctcctattccctcaattcctccctctctgggtatccgccca 495

                                                                       
Query: 181 ctggcaccgctaccgctaccgcgggcaccggttattcggccacctgtgccgcaaaatggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctggcaccgctaccgctaccgcgggcaccggttattcggccacctgtgccgcaaaatggc 555

                                                                       
Query: 241 gaggttggatctagcgattctgattcggaccatgatgacgcggacaccaccaggattaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gaggttggatctagcgattctgattcggaccatgatgacgcggacaccaccaggattaac 615

                                                                       
Query: 301 aagggtaccggggagtatgagatatctgaagagagtagacaggtcagggagcggcaggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aagggtaccggggagtatgagatatctgaagagagtagacaggtcagggagcggcaggaa 675

                                                                       
Query: 361 aaagcgaagcaggaactcttgttgaagaggcgtgctgccgcgcttgctgttcctacgaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaagcgaagcaggaactcttgttgaagaggcgtgctgccgcgcttgctgttcctacgaat 735

                                                                     
Query: 421 gacatggctgtgcgagctcgtcttcgccaccttggtgagccgatcactctctttggtg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gacatggctgtgcgagctcgtcttcgccaccttggtgagccgatcactctctttggtg 793


>gnl|LJGI|FS357678 homologue to UniRef100_A7PVR8 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 637

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1272 tgctcgtgtttgggacctgcgaactgggagaagtattcttgctcttgaaggtcatgtcaa 1331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637  tgctcgtgtttgggacctgcgaactgggagaagtattcttgctcttgaaggtcatgtcaa 578

                                                                        
Query: 1332 accgattcttggcattagtttttcacctaatggatatcatttagccacgggtggtgaaga 1391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  accgattcttggcattagtttttcacctaatggatatcatttagccacgggtggtgaaga 518

                                                                        
Query: 1392 caacacttgtcgcatttgggatttaaggaagaagaaatctttgtacaccattcctgctca 1451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517  caacacttgtcgcatttgggatttaaggaagaagaaatctttgtacaccattcctgctca 458

                                                                        
Query: 1452 ctccaatttaatatcccaagttaaatttgagccccaagaaggttactttttggtaactgg 1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457  ctccaatttaatatcccaagttaaatttgagccccaagaaggttactttttggtaactgg 398

                                                                        
Query: 1512 ctcatatgacatgacagctaaggtttggtcagcccgtgactttaagcctgtgaaaacact 1571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397  ctcatatgacatgacagctaaggtttggtcagcccgtgactttaagcctgtgaaaacact 338

                                                                        
Query: 1572 atctgggcatgaagcaaaagttacttctttggatgttcttggagatggtgggtatattgt 1631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337  atctgggcatgaagcaaaagttacttctttggatgttcttggagatggtgggtatattgt 278

                                                                        
Query: 1632 tactgtctcccatgatcgcaccataaagctgtggtcgagcaacatgactaatgataatga 1691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277  tactgtctcccatgatcgcaccataaagctgtggtcgagcaacatgactaatgataatga 218

                                  
Query: 1692 acacaccatggatgttgactaa 1713
            ||||||||||||||||||||||
Sbjct: 217  acacaccatggatgttgactaa 196