Miyakogusa Predicted Gene
- Lj5g3v0845630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0845630.1 tr|F6HAA6|F6HAA6_VITVI Ubiquitin
carboxyl-terminal hydrolase OS=Vitis vinifera GN=VIT_06s0009g00890
,54.52,0,UCH,Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAM,NODE_52210_length_3077_cov_27.984726.path2.1
(2796 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV780533 938 0.0
gnl|LJGI|TC75030 weakly similar to UniRef100_A7PGA8 Cluster: Ubi... 618 e-176
gnl|LJGI|BP055131 similar to UniRef100_A7Q084 Cluster: Ubiquitin... 220 4e-56
>gnl|LJGI|AV780533
Length = 530
Score = 938 bits (473), Expect = 0.0
Identities = 519/532 (97%), Gaps = 3/532 (0%)
Strand = Plus / Plus
Query: 158 tcttctccagtaactccgactacttctccgacgacttcgattcctcctactcccaccgtc 217
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttctccagta--tccgactacttctccgacgacttcgattcctcctactcccaccgtc 58
Query: 218 gcttcttccgtgacgatgaccgtgattccgtcgccga-cgagagggtctacctactcccc 276
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 59 gcttcttccgtgacgatgaccgtgattccgtcgccgaacgagagggtctacctactcccc 118
Query: 277 tacaagtggtgggaggaagttgaaggtgaagctgatgatggtggaggaggtgttctgtac 336
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tacgagtggtgggaggaagttgaaggtgaagctgatgatggtggaggaggtgttctgtac 178
Query: 337 acggtgtcgtctagtgctgattctgactctgagattttgctcgaactgactctcgaagag 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acggtgtcgtctagtgctgattctgactctgagattttgctcgaactgactctcgaagag 238
Query: 397 agcggcgaagagagccacgagaagattaagaatctggaggtagagttttccggccgtcag 456
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 239 agcggcgaagagagccacgagaagattaagaatctggaggtagagtttgccggccgtcag 298
Query: 457 tatgcattggtcccggaaggaatgtggttgcgtgctctcaaacggtataatgattttaat 516
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tatgcatcggtcccggaaggaatgtggttgcgtgctctcaaacggtataatgattttaat 358
Query: 517 aatgcagtaaattcagaagaggactgtttgctggatttgttccccttgcaagttaggata 576
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 359 aatgcagtaaattcagaagaggactgtgagctggattcgttccccttgcaagttaggata 418
Query: 577 tcggtttcaggggaaaccagttcactggtagcaacgataagccaaaaggaaaacatggtt 636
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 419 tcggtttcaggggaaaccagttcactggtagcaacgataagccaaaaggagagcatggtt 478
Query: 637 gaattctacaagaaagcttgtggcattttcaatcccgcgtataacccagtgc 688
||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 479 gaattctacaagaaagcttgtggcattttcactcccgcgtataagccagtgc 530
>gnl|LJGI|TC75030 weakly similar to UniRef100_A7PGA8 Cluster: Ubiquitin
carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep:
Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera
(Grape), partial (16%)
Length = 667
Score = 618 bits (312), Expect = e-176
Identities = 324/328 (98%)
Strand = Plus / Plus
Query: 2469 attgcctgaaatcgttgttattcatttgaagagattctcatacagccgatacttcaagaa 2528
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 attgcctgaaatcgttgttattcatttgaagagattttcatacagccgatacttcaagaa 60
Query: 2529 caagctggatacatttgttgacttcccagttaatgatctggacttctcagcttatgttgc 2588
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 caagctggatacatttgttgacttcccagttaatgatctggacttttcagcttatgttgc 120
Query: 2589 tcacatgaattatcagtcttccaatcgctatgtgttgtatgcaattagttgtcactatgg 2648
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcacatgaattatcagttttccaatcgctatgtgttgtatgcaattagttgtcactatgg 180
Query: 2649 agggttgggaggtggtcattatacagcatttgtccgttatggccatgagaaatggtacga 2708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agggttgggaggtggtcattatacagcatttgtccgttatggccatgagaaatggtacga 240
Query: 2709 gtttgatgacaccagggttgcccctgctaatgaggacgagattaagacttctgctgctta 2768
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241 gtttgatgacaccagggttgcccctgctaatgaggacgagattaagacttttgctgctta 300
Query: 2769 tgttcttttttacaggaaagtttagatg 2796
||||||||||||||||||||||||||||
Sbjct: 301 tgttcttttttacaggaaagtttagatg 328
>gnl|LJGI|BP055131 similar to UniRef100_A7Q084 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (4%)
Length = 570
Score = 220 bits (111), Expect = 4e-56
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 2686 tatggccatgagaaatggtacgagtttgatgacaccagggttgcccctgctaatgaggac 2745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tatggccatgagaaatggtacgagtttgatgacaccagggttgcccctgctaatgaggac 389
Query: 2746 gagattaagacttctgctgcttatgttcttttttacaggaaagtttagatg 2796
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagattaagacttctgctgcttatgttcttttttacaggaaagtttagatg 338