Miyakogusa Predicted Gene
- Lj5g3v0845560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0845560.1 Non Chatacterized Hit- tr|G7KD20|G7KD20_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,77.59,2e-16,seg,NULL; Apc5,Anaphase-promoting complex
subunit 5,TPR-containing domain; SUBFAMILY NOT
NAMED,NULL;,gene.g60182.t1.1
(1956 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP035449 similar to UniRef100_A7PJT3 Cluster: Chromosom... 797 0.0
gnl|LJGI|TC78756 similar to UniRef100_A7PC27 Cluster: Chromosome... 537 e-152
gnl|LJGI|FS343454 similar to UniRef100_Q67YV2 Cluster: MRNA, com... 121 2e-26
>gnl|LJGI|BP035449 similar to UniRef100_A7PJT3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 549
Score = 797 bits (402), Expect = 0.0
Identities = 425/434 (97%), Gaps = 9/434 (2%)
Strand = Plus / Minus
Query: 1532 catttaacttggatcttctaaaagcctcagctactcttactctagctgagttgtggctct 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 catttaacttggatcttctaaaagcctcagctactcttactctagctgagttgtggctct 490
Query: 1592 ctcttggatcaaaccatgcaacaagggctctcaacctcgtccatggagctttcccaatga 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctcttggatcaaaccatgcaacaagggctctcaacctcgtccatggagctttcccaatga 430
Query: 1652 ttcttggtcatggtggtttggagcttcgctcacgggcctacattgttgaagcaaaatgct 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttcttggtcatggtggtttggagcttcgctcacgggcctacattgttgaagcaaaatgct 370
Query: 1712 acctttgcaatacaaacttcaaca---------attacaacattgttatagatccattaa 1762
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 369 acctttgcaatacaaacttcaacatctttgaagattacaacattgttatagatccattaa 310
Query: 1763 gacaagcatcagaagaactccaacttttggagtttcatgaattggcggctgaagctttct 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gacaagcatcagaagaactccaacttttggagtttcatgaattggcggctgaagctttct 250
Query: 1823 atctgatggccatggtatatgataaactggggcagtatgaggaaagggaagaagctgcag 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atctgatggccatggtatatgataaactggggcagtatgaggaaagggaagaagctgcag 190
Query: 1883 cttcatttcagaaacacacattggctctcgacaatcctcaagatcaggatgatcctctta 1942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cttcatttcagaaacacacattggctctcgacaatcctcaagatcaggatgatcctctta 130
Query: 1943 ttagcacgttttga 1956
||||||||||||||
Sbjct: 129 ttagcacgttttga 116
>gnl|LJGI|TC78756 similar to UniRef100_A7PC27 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 733
Score = 537 bits (271), Expect = e-152
Identities = 354/383 (92%), Gaps = 9/383 (2%)
Strand = Plus / Plus
Query: 1583 tgtggctctctcttggatcaaaccatgcaacaagggctctcaacctcgtccatggagctt 1642
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3 tgtggctctcccttggatcaaaccatgcaacaagagctctcaacctcgtccatggagctt 62
Query: 1643 tcccaatgattcttggtcatggtggtttggagcttcgctcacgggcctacattgttgaag 1702
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 63 tcccaatgattcttggtcatggtggtttggagctctgctcacgggcctatattgttgaag 122
Query: 1703 caaaatgctacctttgcaatacaaacttcaaca---------attacaacattgttatag 1753
||||||||||||||||| ||||||||||||||| || |||||||||| ||||
Sbjct: 123 caaaatgctacctttgcgatacaaacttcaacatctttgaagatcacaacattgtcatag 182
Query: 1754 atccattaagacaagcatcagaagaactccaacttttggagtttcatgaattggcggctg 1813
|| || | ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||
Sbjct: 183 attcactgagacaagcatcagaagaactccagcttctggagtttcatgaattggcagctg 242
Query: 1814 aagctttctatctgatggccatggtatatgataaactggggcagtatgaggaaagggaag 1873
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 243 aagctttctatctgatggccatggtgtatgataaactggggcagtttgaggaaagggaag 302
Query: 1874 aagctgcagcttcatttcagaaacacacattggctctcgacaatcctcaagatcaggatg 1933
||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 303 aagctgcagcttcatttcagaaacatacactggctctcaccaatcctcaagatcaggatg 362
Query: 1934 atcctcttattagcacgttttga 1956
|||||||||||||||||||||||
Sbjct: 363 atcctcttattagcacgttttga 385
>gnl|LJGI|FS343454 similar to UniRef100_Q67YV2 Cluster: MRNA, complete cds, clone:
RAFL24-07-B09; n=1; Arabidopsis thaliana|Rep: MRNA,
complete cds, clone: RAFL24-07-B09 - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 741
Score = 121 bits (61), Expect = 2e-26
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 4 tttctccggcgttgtattcttgctttcaatttactatcatttgagggtatatgttatctc 63
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 tttctccgacgttgtattcttgctttcaatttactatcatttgagggtatatgctatctc 732
Query: 64 ttgacaagc 72
|||||||||
Sbjct: 733 ttgacaagc 741