Miyakogusa Predicted Gene

Lj5g3v0844480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0844480.1 Non Chatacterized Hit- tr|I1H3M4|I1H3M4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,48.48,3e-18,E1_DerP2_DerF2,MD-2-related lipid-recognition; no
description,NULL; Domain involved in innate
immuni,NODE_45059_length_496_cov_175.022171.path2.1
         (348 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62444                                                      690   0.0  

>gnl|LJGI|TC62444 
          Length = 717

 Score =  690 bits (348), Expect = 0.0
 Identities = 348/348 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagatcaaaaagttcaatctcttgttcttttcaacgctgtgtcttcttcacgccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atggagatcaaaaagttcaatctcttgttcttttcaacgctgtgtcttcttcacgccttc 163

                                                                       
Query: 61  gccaccgccaccgacgttcactattgcgataagaaagctgactatgatgttgaggtcaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gccaccgccaccgacgttcactattgcgataagaaagctgactatgatgttgaggtcaaa 223

                                                                       
Query: 121 ggagttgaaatatctcctgatcccgtcgcaagaggccagcctgctacattcagcattgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggagttgaaatatctcctgatcccgtcgcaagaggccagcctgctacattcagcattgct 283

                                                                       
Query: 181 gcagctacaagtcaagcattatctggagggaaactggtgattgatgtgtcgtattttggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcagctacaagtcaagcattatctggagggaaactggtgattgatgtgtcgtattttggt 343

                                                                       
Query: 241 tggcacgtatatagtgagacccatgacctttgtggagaaacaccttgtcctgtttctgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tggcacgtatatagtgagacccatgacctttgtggagaaacaccttgtcctgtttctgct 403

                                                           
Query: 301 ggcaactttgtgattgcacattcacaagttttgcctggattcactcca 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggcaactttgtgattgcacattcacaagttttgcctggattcactcca 451