Miyakogusa Predicted Gene
- Lj5g3v0841000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0841000.1 Non Chatacterized Hit- tr|I1JGG9|I1JGG9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32560
PE,81.71,0,SNARE,Target SNARE coiled-coil domain; Syntaxin,Syntaxin,
N-terminal; coiled-coil,NULL; t-snare prot,CUFF.54029.1
(1020 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72668 similar to UniRef100_A7QQV5 Cluster: Chromosome... 1600 0.0
gnl|LJGI|TC59242 similar to UniRef100_Q9SVC2 Cluster: Syntaxin-1... 829 0.0
gnl|LJGI|TC80006 494 e-139
gnl|LJGI|TC67951 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-r... 80 3e-14
gnl|LJGI|BW597145 similar to UniRef100_A7QQV5 Cluster: Chromosom... 66 5e-10
>gnl|LJGI|TC72668 similar to UniRef100_A7QQV5 Cluster: Chromosome undetermined
scaffold_145, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_145,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (79%)
Length = 922
Score = 1600 bits (807), Expect = 0.0
Identities = 807/807 (100%)
Strand = Plus / Plus
Query: 1 atgaacgacttattctcctccggctcattctctcgcttccgcggcgaccaagcctcgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgaacgacttattctcctccggctcattctctcgcttccgcggcgaccaagcctcgccg 175
Query: 61 gaccgccaccacgtcatcgagatgacagccgccacaggcggcggcgacggcggatccgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gaccgccaccacgtcatcgagatgacagccgccacaggcggcggcgacggcggatccgga 235
Query: 121 agagtcaatctggacaaattcttcgtggacgtggaggccgtcaaggaggagctaagcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 agagtcaatctggacaaattcttcgtggacgtggaggccgtcaaggaggagctaagcgag 295
Query: 181 ctcgacgcgctagcgcagaggcttcagagcagccatgaacagagcaaaaccttgcacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctcgacgcgctagcgcagaggcttcagagcagccatgaacagagcaaaaccttgcacaac 355
Query: 241 gcgaaaagcgtgaaggagcttcgttctcgcatggacgacgacgtttcggctgccctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcgaaaagcgtgaaggagcttcgttctcgcatggacgacgacgtttcggctgccctgaag 415
Query: 301 aaagcgaagatggtgaagctgaagcttgaggctctggagcggtcaaacgccgcgaaccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaagcgaagatggtgaagctgaagcttgaggctctggagcggtcaaacgccgcgaaccgg 475
Query: 361 aacttgcctggttgcggacccggttcgtcttcggaccggacccggaactccgtggtcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aacttgcctggttgcggacccggttcgtcttcggaccggacccggaactccgtggtcaac 535
Query: 421 gggttgaagaagaagttgaaggactccatggatgttttcaaccgcctccgtgaagttatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gggttgaagaagaagttgaaggactccatggatgttttcaaccgcctccgtgaagttatc 595
Query: 481 tcttcggagtatagggataccgttcaacgccgttacttcaccgtcaccggcgagaatcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tcttcggagtatagggataccgttcaacgccgttacttcaccgtcaccggcgagaatcct 655
Query: 541 gatgaaaaaacgcttgatcgcttgatctctaccggtgagagcgagacctttcttcagaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gatgaaaaaacgcttgatcgcttgatctctaccggtgagagcgagacctttcttcagaag 715
Query: 601 gctattcaagaacaaggaaggggtagaattctggacaccatcaatgagattcaagagagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gctattcaagaacaaggaaggggtagaattctggacaccatcaatgagattcaagagagg 775
Query: 661 catgatgctgtcaaagagatagagaagaatctcatgcagctgcaccaagtgttccttgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 catgatgctgtcaaagagatagagaagaatctcatgcagctgcaccaagtgttccttgac 835
Query: 721 atgacagtgctggtgcaatatcaaggtgagcagttggataacattgagagccatgtgaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 atgacagtgctggtgcaatatcaaggtgagcagttggataacattgagagccatgtgaac 895
Query: 781 agagctagctcctttgtgcacactgga 807
|||||||||||||||||||||||||||
Sbjct: 896 agagctagctcctttgtgcacactgga 922
>gnl|LJGI|TC59242 similar to UniRef100_Q9SVC2 Cluster: Syntaxin-122; n=1; Arabidopsis
thaliana|Rep: Syntaxin-122 - Arabidopsis thaliana
(Mouse-ear cress), partial (37%)
Length = 1245
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 574 ggtgagagcgagacctttcttcagaaggctattcaagaacaaggaaggggtagaattctg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggtgagagcgagacctttcttcagaaggctattcaagaacaaggaaggggtagaattctg 418
Query: 634 gacaccatcaatgagattcaagagaggcatgatgctgtcaaagagatagagaagaatctc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gacaccatcaatgagattcaagagaggcatgatgctgtcaaagagatagagaagaatctc 478
Query: 694 atgcagctgcaccaagtgttccttgacatgacagtgctggtgcaatatcaaggtgagcag 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atgcagctgcaccaagtgttccttgacatgacagtgctggtgcaatatcaaggtgagcag 538
Query: 754 ttggataacattgagagccatgtgaacagagctagctcctttgtgcacactggaactgag 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttggataacattgagagccatgtgaacagagctagctcctttgtgcacactggaactgag 598
Query: 814 cagttacagacagcgcggaagcatcagaaaaacaccaggaaatggacctgtttctgtatt 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cagttacagacagcgcggaagcatcagaaaaacaccaggaaatggacctgtttctgtatt 658
Query: 874 ttgcttcttcttgtgatcatcttggttgtggtgcttgtcactgtgaaaccgtgggaaagt 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttgcttcttcttgtgatcatcttggttgtggtgcttgtcactgtgaaaccgtgggaaagt 718
Query: 934 aatggcagtggcggcaacaatggtggtagtcagccagcaccagcacaaacaactccat 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aatggcagtggcggcaacaatggtggtagtcagccagcaccagcacaaacaactccat 776
>gnl|LJGI|TC80006
Length = 387
Score = 494 bits (249), Expect = e-139
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgaacgacttattctcctccggctcattctctcgcttccgcggcgaccaagcctcgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atgaacgacttattctcctccggctcattctctcgcttccgcggcgaccaagcctcgccg 198
Query: 61 gaccgccaccacgtcatcgagatgacagccgccacaggcggcggcgacggcggatccgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaccgccaccacgtcatcgagatgacagccgccacaggcggcggcgacggcggatccgga 258
Query: 121 agagtcaatctggacaaattcttcgtggacgtggaggccgtcaaggaggagctaagcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agagtcaatctggacaaattcttcgtggacgtggaggccgtcaaggaggagctaagcgag 318
Query: 181 ctcgacgcgctagcgcagaggcttcagagcagccatgaacagagcaaaaccttgcacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctcgacgcgctagcgcagaggcttcagagcagccatgaacagagcaaaaccttgcacaac 378
Query: 241 gcgaaaagc 249
|||||||||
Sbjct: 379 gcgaaaagc 387
>gnl|LJGI|TC67951 similar to UniRef100_Q9ZSD5 Cluster: Syntaxin-related protein
Nt-syr1; n=1; Nicotiana tabacum|Rep: Syntaxin-related
protein Nt-syr1 - Nicotiana tabacum (Common tobacco),
partial (91%)
Length = 1481
Score = 79.8 bits (40), Expect = 3e-14
Identities = 214/272 (78%)
Strand = Plus / Plus
Query: 481 tcttcggagtatagggataccgttcaacgccgttacttcaccgtcaccggcgagaatcct 540
||||| ||||| ||||| ||||| ||||| | |||| |||||| ||||| |||||||||
Sbjct: 611 tcttctgagtacagggacaccgtgcaacgtagatactacaccgttaccggagagaatcct 670
Query: 541 gatgaaaaaacgcttgatcgcttgatctctaccggtgagagcgagacctttcttcagaag 600
||||| ||||| |||||| | | ||||| || ||||| || || || || | |||||
Sbjct: 671 gatgagaaaaccattgatctcctcatctccactggtgaaagtgaaacattcttgcagaaa 730
Query: 601 gctattcaagaacaaggaaggggtagaattctggacaccatcaatgagattcaagagagg 660
|| || ||| ||||||| || | | ||| ||||||| ||| | |||||||||||||||
Sbjct: 731 gccatccaacaacaaggtagagccaccattatggacacaatccaagagattcaagagagg 790
Query: 661 catgatgctgtcaaagagatagagaagaatctcatgcagctgcaccaagtgttccttgac 720
||||| | || ||||||||||||| | | |||| ||||||||||||| ||| | |||
Sbjct: 791 catgactcggtgaaagagatagagaggcacctcaacgagctgcaccaagttttcatggac 850
Query: 721 atgacagtgctggtgcaatatcaaggtgagca 752
||| ||||||| || |||| || ||||||||
Sbjct: 851 atggcagtgctagtccaatcccagggtgagca 882
>gnl|LJGI|BW597145 similar to UniRef100_A7QQV5 Cluster: Chromosome undetermined
scaffold_145, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_145,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 488
Score = 65.9 bits (33), Expect = 5e-10
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 632 tggacaccatcaatgagattcaagagaggcatgatgctgtcaaagagatagagaagaatc 691
||||||| ||| | |||||||||||||||||||| | || ||||||||||||| | | |
Sbjct: 315 tggacacaatccaagagattcaagagaggcatgactcggtgaaagagatagagaggcacc 374
Query: 692 tcatgcagctgcaccaagtgttccttgacatgacagtgctggtgcaatatcaaggtgagc 751
||| ||||||||||||| ||| | |||||| ||||||| || |||| || |||||||
Sbjct: 375 tcaacgagctgcaccaagttttcatggacatggcagtgctagtccaatcccagggtgagc 434
Query: 752 a 752
|
Sbjct: 435 a 435