Miyakogusa Predicted Gene

Lj5g3v0817620.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0817620.2 tr|Q7XVU7|Q7XVU7_ORYSJ OSJNBa0035B13.4 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0035B13.4
PE,34.55,7e-18,FPL,Uncharacterised protein family FPL; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.54005.2
         (2397 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778217 weakly similar to UniRef100_A7PP57 Cluster: Ch...   492   e-138

>gnl|LJGI|AV778217 weakly similar to UniRef100_A7PP57 Cluster: Chromosome chr8
            scaffold_23, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 530

 Score =  492 bits (248), Expect = e-138
 Identities = 284/296 (95%)
 Strand = Plus / Minus

                                                                        
Query: 2102 cgattgctccattggcagggttacgtcctaagatagatgaagaccacccctcgtggttgc 2161
            |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 530  cgattgctccattgccagggttacgtcctaagatagatgaagaccacccctcctgcttgc 471

                                                                        
Query: 2162 atcttcgtattagagagtttggcccacagttttatacaattaaaacaagaggaaacccac 2221
            |||||||||||||||||||||||||||  | ||||||||||| ||| |||||||||||||
Sbjct: 470  atcttcgtattagagagtttggcccaccctcttatacaattacaactagaggaaacccac 411

                                                                        
Query: 2222 tgaacatgcctgatcactcggcagatgggaaatggactcttggtttcacagatgcaaaag 2281
            || ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 410  tgcacatgcctgatcactcgccagatgggaaatggactcttggtttcacagatgccaaag 351

                                                                        
Query: 2282 cttgtgaggaagctcggttagctattctgaatgaaattactaagcagagatcagccgtgg 2341
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 350  cttgtgaggaagctcggttagctattctgaatgaaattactaagcagagatcagccctgg 291

                                                                    
Query: 2342 agtatgtgcttgctcctttacttcagaatgatcctggattagctgaaagctgaggt 2397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290  agtatgtgcttgctcctttacttcagaatgatcctggattagctgaaagctgaggt 235