Miyakogusa Predicted Gene

Lj5g3v0816340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0816340.1 Non Chatacterized Hit- tr|I1JGJ7|I1JGJ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43779
PE,78.54,0,E2F_TDP,Transcription factor E2F/dimerisation partner
(TDP); seg,NULL; TRANSCRIPTION FACTOR E2F,NULL,CUFF.53982.1
         (1413 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS340221 similar to UniRef100_Q9C5B5 Cluster: E2F-4 pro...  1041   0.0  

>gnl|LJGI|FS340221 similar to UniRef100_Q9C5B5 Cluster: E2F-4 protein; n=1;
           Arabidopsis thaliana|Rep: E2F-4 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (13%)
          Length = 720

 Score = 1041 bits (525), Expect = 0.0
 Identities = 528/529 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccagcaccgctggagcttctgacaatcgcgccacgccaccgctccaacctcccaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgtccagcaccgctggagcttctgacaatcgcgccacgccaccgctccaacctcccaac 251

                                                                       
Query: 61  cgcccaccactcaaacgccacctggcctttgcttccaccaagccgccatttgctccgccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgcccaccactcaaacgccacctggcctttgcttccaccaagccgccatttgctccgccc 311

                                                                       
Query: 121 gatgattaccacaccttttccgccgccgccacgaccgccgctggtcccgattctaggaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gatgattaccacaccttttccgccgccgccacgaccgccgctggtcccgattctaggaga 371

                                                                       
Query: 181 ggcgcccatcacgagcctgaagctgtcgttgtcagatctccgttcataaagcggaagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcgcccatcacgagcctgaagctgtcgttgtcagatctccgttcataaagcggaagaat 431

                                                                       
Query: 241 ggaatgaataacaatgaaggagactcacaaaagtggggtaatagccctggaggcactaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggaatgaataacaatgaaggagactcacaaaagtggggtaatagccctggaggcactaac 491

                                                                       
Query: 301 gtcatgaatagtccttttaaaactcctgtgtctgcaaaagggggaaggacacataagtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtcatgaatagtccttttaaaactcctgtgtctgcaaaagggggaaggacacataagtta 551

                                                                       
Query: 361 aaagtttccaaagaaggcagatcatgtcctccaacacccatctcaaatgctggttcccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaagtttccaaagaaggcagatcatgtcctccaacacccatctcaaatgctggttcccct 611

                                                                       
Query: 421 tctcctcttactcctgctaacaatcgttatgacagttccttaggtcttttgacaagaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tctcctcttactcctgctaacaatcgttatgacagttccttaggtcttttgacaagaaag 671

                                                            
Query: 481 tttatcaatttgatcaagcatgcagaggatggaatgcttgacctaaata 529
           ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tttatcattttgatcaagcatgcagaggatggaatgcttgacctaaata 720