Miyakogusa Predicted Gene
- Lj5g3v0804090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0804090.1 tr|Q46LP7|Q46LP7_PROMT Secreted pentapeptide
repeats protein (Precursor) OS=Prochlorococcus marinus
,39.62,4e-19,Pentapeptide,Pentapeptide repeat; UNCHARACTERIZED,NULL;
seg,NULL; Pentapeptide repeat-like,NULL,CUFF.53977.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75028 homologue to UniRef100_A7PIQ4 Cluster: Chromoso... 1328 0.0
gnl|LJGI|TC80186 similar to UniRef100_A7PIQ4 Cluster: Chromosome... 605 e-172
gnl|LJGI|AV765967 UniRef100_A7PIQ4 Cluster: Chromosome chr13 sca... 68 8e-11
>gnl|LJGI|TC75028 homologue to UniRef100_A7PIQ4 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (72%)
Length = 720
Score = 1328 bits (670), Expect = 0.0
Identities = 676/678 (99%)
Strand = Plus / Plus
Query: 1 atggcttttgttctcaatgtctcattgtcttcaacatccaaacttcatcacaatcatctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 24 atggcttttgttctcaatgtctcattgtcttcaacatccaaacttcatcacaatcatccc 83
Query: 61 tcaaagtcttcaccctccatttccacaagctccacaccttctcttcctctggttctggga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 84 tcaaagtcttcaccctccatttccacaagctccacacctcctcttcctctggttctggga 143
Query: 121 ctcaatccgaagcaaagtctcaaagcctctcaaaaactcacattttcactggctgaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ctcaatccgaagcaaagtctcaaagcctctcaaaaactcacattttcactggctgaatca 203
Query: 181 ctgcctagtgctgccatcgttgctctcctctctgcttctttcttctttgttgatcctgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctgcctagtgctgccatcgttgctctcctctctgcttctttcttctttgttgatcctgcg 263
Query: 241 cttgcattcaggggtggaggaccatatgggcaagaggtgactaggggacaagatctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttgcattcaggggtggaggaccatatgggcaagaggtgactaggggacaagatctttct 323
Query: 301 gggaaggatttcagtggcaggactttgatcaagcaagacttcaaaacgtctatacttcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggaaggatttcagtggcaggactttgatcaagcaagacttcaaaacgtctatacttcga 383
Query: 361 caagccaattttaaaggtgcaaagttgttaggtgctagcttctttgattctgatttaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caagccaattttaaaggtgcaaagttgttaggtgctagcttctttgattctgatttaaca 443
Query: 421 ggtgctgatctttctgatgctgatcttagaagtgcagatttttctctggcaaatgtgact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtgctgatctttctgatgctgatcttagaagtgcagatttttctctggcaaatgtgact 503
Query: 481 aaggcaaatttgagcaatgctaacttggaaggtgcacttgcaacgggaaatacatcattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggcaaatttgagcaatgctaacttggaaggtgcacttgcaacgggaaatacatcattt 563
Query: 541 aagggatcaaatattacaggcgccgatttcactgatgtgccattaagagatgatcaacgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagggatcaaatattacaggcgccgatttcactgatgtgccattaagagatgatcaacgt 623
Query: 601 gaatacctatgtaaagttgctgatggagtgaacccaacaactggaaatgctacgcgtgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaatacctatgtaaagttgctgatggagtgaacccaacaactggaaatgctacgcgtgaa 683
Query: 661 acattgctatgcaattag 678
||||||||||||||||||
Sbjct: 684 acattgctatgcaattag 701
>gnl|LJGI|TC80186 similar to UniRef100_A7PIQ4 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 389
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 1 atggcttttgttctcaatgtctcattgtcttcaacatccaaacttcatcacaatcatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggcttttgttctcaatgtctcattgtcttcaacatccaaacttcatcacaatcatctc 144
Query: 61 tcaaagtcttcaccctccatttccacaagctccacaccttctcttcctctggttctggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcaaagtcttcaccctccatttccacaagctccacaccttctcttcctctggttctggga 204
Query: 121 ctcaatccgaagcaaagtctcaaagcctctcaaaaactcacattttcactggctgaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcaatccgaagcaaagtctcaaagcctctcaaaaactcacattttcactggctgaatca 264
Query: 181 ctgcctagtgctgccatcgttgctctcctctctgcttctttcttctttgttgatcctgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgcctagtgctgccatcgttgctctcctctctgcttctttcttctttgttgatcctgcg 324
Query: 241 cttgcattcaggggtggaggaccatatgggcaagaggtgactaggggacaagatctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttgcattcaggggtggaggaccatatgggcaagaggtgactaggggacaagatctttct 384
Query: 301 gggaa 305
|||||
Sbjct: 385 gggaa 389
>gnl|LJGI|AV765967 UniRef100_A7PIQ4 Cluster: Chromosome chr13 scaffold_17, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 241
Score = 67.9 bits (34), Expect = 8e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 644 gaaatgctacgcgtgaaacattgctatgcaatta 677
||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaatgctacgcgtgaaacattgctatgcaatta 208