Miyakogusa Predicted Gene
- Lj5g3v0711050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0711050.1 tr|Q0IC52|Q0IC52_SYNS3 Peptidyl-prolyl cis-trans
isomerase OS=Synechococcus sp. (strain CC9311)
GN=s,37.86,0.000000000000002,FKBP_C,Peptidyl-prolyl cis-trans
isomerase, FKBP-type, domain; IMMUNOPHILIN / FKBP-TYPE
PEPTIDYL-PRO,CUFF.53850.1
(684 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61974 similar to UniRef100_Q6H6D3 Cluster: Peptidyl-p... 874 0.0
gnl|LJGI|BP048724 homologue to UniRef100_A7P2R5 Cluster: Peptidy... 250 1e-65
>gnl|LJGI|TC61974 similar to UniRef100_Q6H6D3 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Oryza sativa Japonica Group|Rep:
Peptidyl-prolyl cis-trans isomerase - Oryza sativa
subsp. japonica (Rice), partial (73%)
Length = 793
Score = 874 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 240 tgagctccccaattccggtggcgttaaggcattggacctccttgttggttcaggtgatgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tgagctccccaattccggtggcgttaaggcattggacctccttgttggttcaggtgatgt 218
Query: 300 tcccgcaaatggagaccaggttgcaattcattactatggccggctggcagcaaaacaagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcccgcaaatggagaccaggttgcaattcattactatggccggctggcagcaaaacaagg 278
Query: 360 atggcgttttgactcaacctatgaccacaaagatgagaatggggatcctaatccttttgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atggcgttttgactcaacctatgaccacaaagatgagaatggggatcctaatccttttgt 338
Query: 420 ctttgtccttggtgctggcaaggtaattgctggaattgattttgcagtgagatcgatgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctttgtccttggtgctggcaaggtaattgctggaattgattttgcagtgagatcgatgaa 398
Query: 480 agtaggtggtattcgtagagtcatcatacctccttcccttggctaccagaacacatcaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agtaggtggtattcgtagagtcatcatacctccttcccttggctaccagaacacatcaca 458
Query: 540 ggagcccatcccacctaatttctttgacaggcagaggctgttcactaccatttttaatcc 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 459 ggagcccatcccacctaatttctttgacaggcggaggctgttcactaccatttttaatcc 518
Query: 600 aactcggcttgcaaatggtgaaggctcaactttagggacacttatttttgatattgaact 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aactcggcttgcaaatggtgaaggctcaactttagggacacttatttttgatattgaact 578
Query: 660 ggttagccttaggcaccagtgatat 684
|||||||||||||||||||||||||
Sbjct: 579 ggttagccttaggcaccagtgatat 603
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 85 atgtttgcaacttgttcagcatcttctacaattccaagaagatctttatctctgt 139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgtttgcaacttgttcagcatcttctacaattccaagaagatctttatctctgt 58
>gnl|LJGI|BP048724 homologue to UniRef100_A7P2R5 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(18%)
Length = 513
Score = 250 bits (126), Expect = 1e-65
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 559 ttctttgacaggcagaggctgttcactaccatttttaatccaactcggcttgcaaatggt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttctttgacaggcagaggctgttcactaccatttttaatccaactcggcttgcaaatggt 160
Query: 619 gaaggctcaactttagggacacttatttttgatattgaactggttagccttaggcaccag 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaaggctcaactttagggacacttatttttgatattgaactggttagccttaggcaccag 100
Query: 679 tgatat 684
||||||
Sbjct: 99 tgatat 94