Miyakogusa Predicted Gene

Lj5g3v0709830.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0709830.3 Non Chatacterized Hit- tr|B9FEM7|B9FEM7_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,41.88,5e-18,no
description,DNA glycosylase; ENDONUCLEASE III-RELATED,NULL;
A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDO,CUFF.53869.3
         (1797 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82047                                                      515   e-145

>gnl|LJGI|TC82047 
          Length = 531

 Score =  515 bits (260), Expect = e-145
 Identities = 260/260 (100%)
 Strand = Plus / Minus

                                                                       
Query: 567 cagttcggcatatatgtcccttgctgctcggttccccccaaagccaagcagcatgcggaa 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagttcggcatatatgtcccttgctgctcggttccccccaaagccaagcagcatgcggaa 201

                                                                       
Query: 627 aacatgccacggtgaaggcacaagcttggaagtcaatgaaccacaagtgcagatagtgga 686
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aacatgccacggtgaaggcacaagcttggaagtcaatgaaccacaagtgcagatagtgga 141

                                                                       
Query: 687 accggaagagaacacagaatgcgatgtcaaattactgaatcaatctcttcatgaccagag 746
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 accggaagagaacacagaatgcgatgtcaaattactgaatcaatctcttcatgaccagag 81

                                                                       
Query: 747 ttttacgactatagatatagctaagcattctggagaaaaagaagctgtagagagcaatga 806
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  ttttacgactatagatatagctaagcattctggagaaaaagaagctgtagagagcaatga 21

                               
Query: 807 ttcctgcagaattaccagta 826
           ||||||||||||||||||||
Sbjct: 20  ttcctgcagaattaccagta 1



 Score =  184 bits (93), Expect = 1e-45
 Identities = 93/93 (100%)
 Strand = Plus / Minus

                                                                       
Query: 477 aggagacaggcgattttctcgatggaaaggatcagttgtggattcagtggtaggagtttt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aggagacaggcgattttctcgatggaaaggatcagttgtggattcagtggtaggagtttt 369

                                            
Query: 537 cctcactcaaaatgtgtcggaccatctttccag 569
           |||||||||||||||||||||||||||||||||
Sbjct: 368 cctcactcaaaatgtgtcggaccatctttccag 336