Miyakogusa Predicted Gene

Lj5g3v0709830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0709830.1 CUFF.53869.1
         (4119 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP063858                                                     375   e-102
gnl|LJGI|TC82047                                                      222   1e-56
gnl|LJGI|TC69777                                                      153   1e-35

>gnl|LJGI|BP063858 
          Length = 428

 Score =  375 bits (189), Expect = e-102
 Identities = 199/201 (99%), Gaps = 1/201 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaggttgaggaaatggacagagacaaggtggaggttgggattccatggatccccaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atggaggttgaggaaatggacagagacaaggtggaggttgggattccatggatccccaac 141

                                                                       
Query: 61  acacccattaagctttctggtccaaaaccagctccgatctgcacggcggcggaggaaaac 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 140 acacccattaagctttctggtccaaaaccagctccgatctgcacggcgacggaggaaaac 81

                                                                       
Query: 121 catctgggtcaccgtgccaatgaagcagttgcatgcggtgaagaaaaagacaaaagggtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 80  catctgggtcaccgtgccaatgaagcagttgcatgcggtgaagaaaaagacaaaa-ggtc 22

                                
Query: 181 acctgtgatgacgtgtcagtg 201
           |||||||||||||||||||||
Sbjct: 21  acctgtgatgacgtgtcagtg 1


>gnl|LJGI|TC82047 
          Length = 531

 Score =  222 bits (112), Expect = 1e-56
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                        
Query: 4008 aggagacaggcgattttctcgatggaaaggatcagttgtggattcagtggtaggagtttt 4067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428  aggagacaggcgattttctcgatggaaaggatcagttgtggattcagtggtaggagtttt 369

                                                                
Query: 4068 cctcactcaaaatgtgtcggaccatctttccaggtataaactctactagttt 4119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368  cctcactcaaaatgtgtcggaccatctttccaggtataaactctactagttt 317


>gnl|LJGI|TC69777 
          Length = 701

 Score =  153 bits (77), Expect = 1e-35
 Identities = 119/133 (89%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaggttgaggaaatggacagagacaaggtggaggttgggattccatggatccccaac 60
           |||||||||||||||||||||  |   ||||||||| ||||||||||||||||||| || 
Sbjct: 143 atggaggttgaggaaatggacccaaggaaggtggagtttgggattccatggatccctaaa 84

                                                                       
Query: 61  acacccattaagctttctggtccaaaaccagctccgatctgcacggcggcggaggaaaac 120
           ||||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||
Sbjct: 83  acacccattaagcttcctggtccaaaaccagctccgatctgcacggtggcaggggaaaac 24

                        
Query: 121 catctgggtcacc 133
           | | |||||||||
Sbjct: 23  cgtttgggtcacc 11