Miyakogusa Predicted Gene
- Lj5g3v0707740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0707740.1 Non Chatacterized Hit- tr|I1L972|I1L972_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.94,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,NULL;
Nucleotide-diphospho-sugar tra,CUFF.53824.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343028 similar to UniRef100_A3QT94 Cluster: Cellulose... 914 0.0
gnl|LJGI|FS336585 similar to UniRef100_A7PPK8 Cluster: Chromosom... 117 8e-26
gnl|LJGI|TC59481 similar to UniRef100_A7PQJ9 Cluster: Chromosome... 56 2e-07
>gnl|LJGI|FS343028 similar to UniRef100_A3QT94 Cluster: Cellulose synthase-like A1;
n=1; Pinus taeda|Rep: Cellulose synthase-like A1 - Pinus
taeda (Loblolly pine), partial (28%)
Length = 765
Score = 914 bits (461), Expect = 0.0
Identities = 461/461 (100%)
Strand = Plus / Plus
Query: 1 atggatacgtttcaagaagcagatgttacttcccaaattgggttggtttggagccaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atggatacgtttcaagaagcagatgttacttcccaaattgggttggtttggagccaaatc 364
Query: 61 agagagccactgattgtgccactgctgagggtgtcagtgtttctgtgcttggccatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agagagccactgattgtgccactgctgagggtgtcagtgtttctgtgcttggccatgtca 424
Query: 121 ctgatgatgtttgttgagagggtttacatgagcattgtgatttgtttggtgaagatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctgatgatgtttgttgagagggtttacatgagcattgtgatttgtttggtgaagatgttt 484
Query: 181 ggtcaaaaaccagagaagcgttacaaatgggagcctgtgaaggatgatgttgagcttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggtcaaaaaccagagaagcgttacaaatgggagcctgtgaaggatgatgttgagcttgga 544
Query: 241 aactctacttacccaatggttcttgttcaagttcctatgtacaacgaaagagaggtttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aactctacttacccaatggttcttgttcaagttcctatgtacaacgaaagagaggtttat 604
Query: 301 cagctgtccattggagcagcatgtggcctttcttggccttcagataggatcatcatacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cagctgtccattggagcagcatgtggcctttcttggccttcagataggatcatcatacaa 664
Query: 361 attcttgatgactccactgacccaacaatcaaggagttggtgaaggttgaatgcagtaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 attcttgatgactccactgacccaacaatcaaggagttggtgaaggttgaatgcagtaga 724
Query: 421 tggagaagcaaaggggtgaatataaagtatgaggtgaggga 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tggagaagcaaaggggtgaatataaagtatgaggtgaggga 765
>gnl|LJGI|FS336585 similar to UniRef100_A7PPK8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 761
Score = 117 bits (59), Expect = 8e-26
Identities = 298/375 (79%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 190 ccagagaagcgttacaaatgggagcctgtgaaggatgatgttgagcttggaaactctact 249
|||||||||| |||||||||||| || | | |||||| ||||||||||||||||| |
Sbjct: 217 ccagagaagcattacaaatgggaaccactcagggatgacattgagcttggaaactctgca 276
Query: 250 tacccaatggttcttgttcaagttcctatgtacaacgaaagagaggtttatcagctgtcc 309
||||| |||||||| || ||| | || |||||||| || | |||||| ||||| | ||
Sbjct: 277 taccccatggttctggtgcaaatcccaatgtacaatgagaaagaggtgtatcaattatca 336
Query: 310 attggagcagcatgtggcctttcttggccttcagataggatcatcatacaaattcttgat 369
||||| || |||||||| | || ||||| || ||||| || || || ||| ||||||||
Sbjct: 337 attggtgctgcatgtgggttatcatggccatctgatagaattattattcaagttcttgat 396
Query: 370 gactccactgacccaacaatcaaggagttggtgaaggttgaatg-cagtagatggagaag 428
|| || || ||||||| || ||| | ||||| |||| ||||| ||| |||||| ||
Sbjct: 397 gattcaacagacccaatcattaagaatatggtggaggtggaatgtcag-agatgggccag 455
Query: 429 caaaggggtgaatataaagtatgaggtgagggataacagaagtgggtacaaagcaggtgc 488
|||||| | || |||||||||||| | ||||| ||||||| |||||||||||| || ||
Sbjct: 456 caaaggcctaaacataaagtatgagatcagggagaacagaaatgggtacaaagctggggc 515
Query: 489 tcttaaagagggaatgaaacgcagctacgtgagccaatgtgattatgttgccatctttga 548
||| |||| || ||||| | |||||| || | | |||||| ||||| |||||||||||
Sbjct: 516 tctcaaagcaggcatgaagcacagctatgtcaaactatgtgactatgtggccatctttga 575
Query: 549 tgctgattttcaacc 563
||||||||| |||||
Sbjct: 576 tgctgatttccaacc 590
>gnl|LJGI|TC59481 similar to UniRef100_A7PQJ9 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1319
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 266 ttcaagttcctatgtacaacgaaagagaggtttatcagctgtccattggagcagcatgtg 325
||||| |||| |||| ||| |||| ||||||||| || | |||||||||||||| ||||
Sbjct: 675 ttcaaattccaatgttcaatgaaaaagaggtttacaaggtctccattggagcagcttgtg 734
Query: 326 gcctttcttggccttcagat 345
| ||||| |||||| |||||
Sbjct: 735 gtctttcatggcctacagat 754