Miyakogusa Predicted Gene
- Lj5g3v0670590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0670590.1 Non Chatacterized Hit- tr|I1LZA9|I1LZA9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22565
PE,90.55,0,Ras,Small GTPase superfamily; small_GTP: small GTP-binding
protein domain,Small GTP-binding protein ,CUFF.53707.1
(636 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus jap... 545 e-154
gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromoso... 88 8e-17
gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 82 5e-15
gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 82 5e-15
gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 52 4e-06
gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 52 4e-06
>gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus japonicus|Rep: RAB1X -
Lotus japonicus, complete
Length = 1129
Score = 545 bits (275), Expect = e-154
Identities = 521/603 (86%)
Strand = Plus / Plus
Query: 30 ctatgatctctctttcaagatcttgttgatcggtgattctgctgttgggaaaagtagcct 89
|||||||||||||||||||||||||||||| || ||||||| ||| || ||||| |||||
Sbjct: 139 ctatgatctctctttcaagatcttgttgattggagattctggtgtgggaaaaagcagcct 198
Query: 90 acttgttagctttatctctaactctgttcatgatattggccccacaattggtgttgattt 149
|||||| ||||| || || | ||||| | ||| ||||| ||||||||||||||
Sbjct: 199 acttgtcagcttcatttccagttctgtagaggatcaatcacccaccattggtgttgattt 258
Query: 150 taagatcaagctgctcacagttggtgggaagagattgaaattaactatttgggacactgc 209
||||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||| ||
Sbjct: 259 taagatcaaaatgctcacagtaggtgggaagagattaaaactaacaatttgggacacagc 318
Query: 210 tgggcaagaaaggttcagaacgctaactagttcttactatagaggagcacaaggaatcat 269
|| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 319 gggacaggaaaggttcaggactctaaccagttcttactatagaggagcgcaaggaatcat 378
Query: 270 tcttgtttatgatgtatcaagaagagacacatttacaaacttatcagaagtgtggtctaa 329
||||||||||||||| ||| |||||| || |||||||||||||| ||||||||||||||
Sbjct: 379 tcttgtttatgatgtcacaaaaagagaaacctttacaaacttatccgaagtgtggtctaa 438
Query: 330 agaagtggaactctattcaactaatcaggattgtgtgaaggtgctagttggaaataaagt 389
||| ||||||||||||||| |||||| ||||| |||||| |||||||||||||||||||
Sbjct: 439 ggaactggaactctattcaagtaatcaagattgcgtgaagatgctagttggaaataaagt 498
Query: 390 tgataaagattccgaaagggttgtgagcagagaagagggtatagctcttgcggaagagtt 449
||||| |||| | | |||| ||||||||||||||||||| |||| ||||| |||| |
Sbjct: 499 tgatagagatgctgctagggctgtgagcagagaagagggtttagcccttgccaaagaact 558
Query: 450 gggatgtttgttttttgaatgtagtgccaaaactcgagagaatgtggagcgatgctttga 509
||| |||||| || ||||||| ||||| ||||||||||| |||||||| | |||||||||
Sbjct: 559 ggggtgtttgcttattgaatgcagtgctaaaactcgagaaaatgtggaacaatgctttga 618
Query: 510 ggaacttgcactgaagataatggaagttccgagtcttttggaagaaggatcaacagcagt 569
||||| || || ||||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 619 agaactggctctaaagataatggaagctcctagtcttctggaagaaggatcaacagcagt 678
Query: 570 gaaaaggaatattttaaagcaaaaacaggaaccccaagcatcccaagatgttggttgttg 629
|||||||||||||| ||||| ||||| ||||| |||||||||||| ||| |||||||||
Sbjct: 679 aaaaaggaatattttgaagcagaaacaagaacctcaagcatcccaacatggtggttgttg 738
Query: 630 ctc 632
|||
Sbjct: 739 ctc 741
>gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 885
Score = 87.7 bits (44), Expect = 8e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 194 ctatttgggacactgctgggcaagaaaggttcagaacgctaactagttcttactatagag 253
||||||||||||| ||||| || |||||||| ||||| || |||||||| || |||||||
Sbjct: 327 ctatttgggacacagctggacaggaaaggtttagaacacttactagttcatattatagag 386
Query: 254 gagcacaaggaatcattcttgtttatgatgta 285
||||||||||||| ||| | || |||||||||
Sbjct: 387 gagcacaaggaataattatggtatatgatgta 418
>gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, partial (98%)
Length = 791
Score = 81.8 bits (41), Expect = 5e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 196 atttgggacactgctgggcaagaaaggttcagaacgctaactagttcttactatagagga 255
|||||||| |||||||| ||||| || || ||||| || || || ||||||||||||||
Sbjct: 305 atttgggatactgctggccaagagagatttagaacacttacaagctcttactatagaggg 364
Query: 256 gcacaaggaatcattcttgtttatgatgtatcaagaagagacacatttacaaa 308
|||||||||||||| | |||||||||||| | || |||| |||||||||||
Sbjct: 365 gcacaaggaatcatcatggtttatgatgtaacccgacgagatacatttacaaa 417
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 129 ccccacaattggtgttgattttaagatcaa 158
||||||||||||||||||||||||| ||||
Sbjct: 238 ccccacaattggtgttgattttaaggtcaa 267
>gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, complete
Length = 985
Score = 81.8 bits (41), Expect = 5e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 196 atttgggacactgctgggcaagaaaggttcagaacgctaactagttcttactatagagga 255
|||||||| |||||||| ||||| || || ||||| || || || ||||||||||||||
Sbjct: 244 atttgggatactgctggccaagagagatttagaacacttacaagctcttactatagaggg 303
Query: 256 gcacaaggaatcattcttgtttatgatgtatcaagaagagacacatttacaaa 308
|||||||||||||| | |||||||||||| | || |||| |||||||||||
Sbjct: 304 gcacaaggaatcatcatggtttatgatgtaacccgacgagatacatttacaaa 356
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 129 ccccacaattggtgttgattttaagatcaa 158
||||||||||||||||||||||||| ||||
Sbjct: 177 ccccacaattggtgttgattttaaggtcaa 206
>gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 956
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 243 ttactatagaggagcacaaggaatcattcttgtttatgatgt 284
|||||||||||||||||| ||||| ||| |||| ||||||||
Sbjct: 278 ttactatagaggagcacatggaataattattgtctatgatgt 319
>gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 885
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 243 ttactatagaggagcacaaggaatcattcttgtttatgatgt 284
|||||||||||||||||| ||||| ||| |||| ||||||||
Sbjct: 356 ttactatagaggagcacatggaataattattgtctatgatgt 397