Miyakogusa Predicted Gene

Lj5g3v0670250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0670250.1 tr|C7LY50|C7LY50_ACIFD RimK domain protein
ATP-grasp OS=Acidimicrobium ferrooxidans (strain DSM
1033,40,2.5,seg,NULL,CUFF.53719.1
         (195 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76768                                                       86   9e-17
gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chr...    82   1e-15
gnl|LJGI|TC79898 homologue to UniRef100_A8YAX2 Cluster: Genome s...    78   2e-14
gnl|LJGI|BI417964                                                      50   5e-06

>gnl|LJGI|TC76768 
          Length = 560

 Score = 85.7 bits (43), Expect = 9e-17
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                      
Query: 91  gtgcgtgaccggcgacaatggtggtggcttgggcggcggctcc 133
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gtgcgtgaccggcgacaatggtggtggcttgggcggcggctcc 97


>gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chromosome 17
           SCAF15006, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 17 SCAF15006, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (3%)
          Length = 499

 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                    
Query: 93  gcgtgaccggcgacaatggtggtggcttgggcggcggctcc 133
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcgtgaccggcgacaatggtggtggcttgggcggcggctcc 77


>gnl|LJGI|TC79898 homologue to UniRef100_A8YAX2 Cluster: Genome sequencing data,
           contig C262; n=1; Microcystis aeruginosa PCC 7806|Rep:
           Genome sequencing data, contig C262 - Microcystis
           aeruginosa PCC 7806, partial (10%)
          Length = 547

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                      
Query: 91  gtgcgtgaccggcgacaatggtggtggcttgggcggcggctcc 133
           ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 140 gtgcgtgaccggcaacaatggtggtggcttgggcggcggctcc 98



 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 1   atggaaagaaggttcaaaagctgctg 26
           ||||||||||||||||||||||||||
Sbjct: 230 atggaaagaaggttcaaaagctgctg 205


>gnl|LJGI|BI417964 
          Length = 433

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 109 tggtggtggcttgggcggcggctcc 133
           |||||||||||||||||||||||||
Sbjct: 68  tggtggtggcttgggcggcggctcc 44