Miyakogusa Predicted Gene
- Lj5g3v0659720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0659720.1 CUFF.53661.1
(1398 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 309 3e-83
gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 157 2e-37
gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 92 1e-17
gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chr... 90 4e-17
gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosom... 76 7e-13
>gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1330
Score = 309 bits (156), Expect = 3e-83
Identities = 490/600 (81%), Gaps = 21/600 (3%)
Strand = Plus / Plus
Query: 13 gatggattcaagtttcttgagcttgtgggacttataatcgacatacctgttatactgttg 72
|||||||||||| |||||||||||||||| ||| || ||| ||||||| ||| |||||
Sbjct: 130 gatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtcataatgttg 189
Query: 73 tctgtaaatggcgactcgaatatggtgatgaagggaattactcacggcgcttgtcattat 132
||||| ||||||||| |||| |||||| |||||||||||||||| ||||||||| |||||
Sbjct: 190 tctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgcttgtgattat 249
Query: 133 atgctgaaacctgttagagttgaggagctaaagaccatttggcagcatgtaatcag---g 189
||||||||||||||||||||||||||||| || ||||||||||||||| |||| |
Sbjct: 250 ctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtggtcaggaag 309
Query: 190 aacaggaaaattggctcgaaggaaaaggaagggaccaaaaccagcagcaaccatgagaca 249
|| | ||| | || | || ||||||||||||||||| | ||||||| || ||
Sbjct: 310 aagaagaagactgtcccg------aaggaagggaccaaaac---cggcaaccaagacact 360
Query: 250 cttaatt---atagcgacaatggtcaagggtccgcagccacaccaaattcagatcaaaat 306
| || || |||| ||||| ||||||||||| ||||| ||| ||||||| |||||||||
Sbjct: 361 cctatttctcatagtgacaacggtcaagggtcggcagcgacaacaaattccgatcaaaat 420
Query: 307 ggaaagtcatccaagaaaagaaagtatc------aagatttcgatgacgtggagcatgag 360
||||| |||||||||||||| ||| | | ||||| ||| | | || |||||||
Sbjct: 421 ggaaaatcatccaagaaaaggaaggacctggaggaagatgatgataatgaggtgcatgag 480
Query: 361 aatggtactgatagtggggactcatcagctccgaagaagcctcgagttgtctggtctggg 420
|||||| || |||| ||| ||||||||| || ||||||||||||||| ||||| |
Sbjct: 481 aatggtgacgacagtgatgacccatcagctcagaggaagcctcgagttgtttggtcggtt 540
Query: 421 gagctacaccaaaaatttcttgctgctgtcaatcagttaggcattgacaaggctgtccct 480
|| || |||| || ||| ||||||| ||||||||||||||| | || |||||||| |||
Sbjct: 541 gacctgcaccgcaagtttgttgctgccgtcaatcagttaggcctggataaggctgtacct 600
Query: 481 aaaaaagttcttaaaatgatggatgttgaaaaccttacaagggagaatgtggccagccat 540
|||| | ||||| |||||||| ||||||| | ||||||||||||||||| |||||||||
Sbjct: 601 aaaagaattcttgaaatgatgaatgttgatcagcttacaagggagaatgttgccagccat 660
Query: 541 ctgcagaaatatagactttatctgaaaagaattagctctatggcgaaccaacaagctaat 600
|| ||||||||||||||||||||||| ||| |||||| | ||| |||||||||||||||
Sbjct: 661 cttcagaaatatagactttatctgaagagacttagctgtgtggaaaaccaacaagctaat 720
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 687 tgatcaatttcaacacagcaagggcgttagtcatattccaaaccagaaca 736
||||||||| ||||||| |||||| ||||||||||||| ||||| |||||
Sbjct: 1056 tgatcaattgcaacacaacaagggtgttagtcatattcaaaacctgaaca 1105
Score = 60.0 bits (30), Expect = 4e-08
Identities = 59/68 (86%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 825 gggaagagtttcaacttcattagcccctcaaga---ttcacaattctctctccctctgct 881
|||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| || |
Sbjct: 1215 gggaggagtttctacttcattagccccacaacaacattcacaattctctctccctttgat 1274
Query: 882 ggataatg 889
||||||||
Sbjct: 1275 ggataatg 1282
>gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 893
Score = 157 bits (79), Expect = 2e-37
Identities = 142/163 (87%)
Strand = Plus / Plus
Query: 391 ccgaagaagcctcgagttgtctggtctggggagctacaccaaaaatttcttgctgctgtc 450
|||||||||||||| ||||| ||||||| |||||| ||| || || ||||||||||
Sbjct: 731 ccgaagaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgtt 790
Query: 451 aatcagttaggcattgacaaggctgtccctaaaaaagttcttaaaatgatggatgttgaa 510
|||||| ||||||||||||||||||| |||||||| |||||| | ||||| ||||||||
Sbjct: 791 aatcagctaggcattgacaaggctgtgcctaaaaaggttcttgatttgatgaatgttgaa 850
Query: 511 aaccttacaagggagaatgtggccagccatctgcagaaatata 553
|| ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 851 aagcttacaagggagaatgtggccagccatttacagaaatata 893
Score = 91.7 bits (46), Expect = 1e-17
Identities = 145/178 (81%)
Strand = Plus / Plus
Query: 13 gatggattcaagtttcttgagcttgtgggacttataatcgacatacctgttatactgttg 72
|||||||| ||| ||||||| ||||| |||||| ||| ||| | ||||| ||| || |
Sbjct: 401 gatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgctt 460
Query: 73 tctgtaaatggcgactcgaatatggtgatgaagggaattactcacggcgcttgtcattat 132
|||| |||||| || | || ||||||||||||| ||| ||||||| || || |||||
Sbjct: 461 tctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgattat 520
Query: 133 atgctgaaacctgttagagttgaggagctaaagaccatttggcagcatgtaatcagga 190
||||||| ||||| ||| | ||||||||||||| ||||||||||||||| |||||||
Sbjct: 521 ctgctgaagcctgtgagaatggaggagctaaagaacatttggcagcatgtgatcagga 578
>gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 819
Score = 91.7 bits (46), Expect = 1e-17
Identities = 145/178 (81%)
Strand = Plus / Plus
Query: 13 gatggattcaagtttcttgagcttgtgggacttataatcgacatacctgttatactgttg 72
|||||||| ||| ||||||| ||||| |||||| ||| ||| | ||||| ||| || |
Sbjct: 375 gatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgctt 434
Query: 73 tctgtaaatggcgactcgaatatggtgatgaagggaattactcacggcgcttgtcattat 132
|||| |||||| || | || ||||||||||||| ||| ||||||| || || |||||
Sbjct: 435 tctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgattat 494
Query: 133 atgctgaaacctgttagagttgaggagctaaagaccatttggcagcatgtaatcagga 190
||||||| ||||| ||| | ||||||||||||| ||||||||||||||| |||||||
Sbjct: 495 ctgctgaagcctgtgagaatggaggagctaaagaacatttggcagcatgtgatcagga 552
Score = 91.7 bits (46), Expect = 1e-17
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 391 ccgaagaagcctcgagttgtctggtctggggagctacaccaaaaatttcttgctgctgtc 450
|||||||||||||| ||||| ||||||| |||||| ||| || || ||||||||||
Sbjct: 705 ccgaagaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgtt 764
Query: 451 aatcagttaggcattgacaaggctgtccctaaaaaagttctt 492
|||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 765 aatcagctaggcattgacaaggctgtgcctaaaaaggttctt 806
>gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 694
Score = 89.7 bits (45), Expect = 4e-17
Identities = 98/115 (85%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 1108 aactcagccttcaatttttgcgatcccttgcaaatgaaccatgatgagatcattgaatta 1167
|||||| ||||||||||| | |||||||| |||||||| ||||||| |||||||||||||
Sbjct: 144 aactcaaccttcaattttggtgatcccttacaaatgaagcatgatgggatcattgaatta 203
Query: 1168 actgaagagtgctcaattaaaccacatcagc---tacatgtaatggaccagcaga 1219
||| |||| |||| | | ||||||||||| ||||||||||| |||||||||
Sbjct: 204 cctggagagccctcattgataccacatcagcaggtacatgtaatgaaccagcaga 258
Score = 63.9 bits (32), Expect = 3e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1044 ttaccattctcatgttagtggtgactcaataggctctatgattcctgcgaatggtg 1099
|||| |||||||||||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 62 ttacaattctcatgttattggtaactcaataggctctacgattcccccgaatggtg 117
>gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 672
Score = 75.8 bits (38), Expect = 7e-13
Identities = 137/170 (80%)
Strand = Plus / Plus
Query: 13 gatggattcaagtttcttgagcttgtgggacttataatcgacatacctgttatactgttg 72
|||||||| ||| ||||||| ||||| |||||| ||| ||| | ||||| ||| || |
Sbjct: 501 gatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgctt 560
Query: 73 tctgtaaatggcgactcgaatatggtgatgaagggaattactcacggcgcttgtcattat 132
|||| |||||| || | || ||||||||||||| ||| ||||||| || || |||||
Sbjct: 561 tctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgattat 620
Query: 133 atgctgaaacctgttagagttgaggagctaaagaccatttggcagcatgt 182
||||| | ||||| ||| | ||||||||||||| |||||||||||||||
Sbjct: 621 ctgctggagcctgtgagaatggaggagctaaagaacatttggcagcatgt 670