Miyakogusa Predicted Gene
- Lj5g3v0659340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0659340.1 Non Chatacterized Hit- tr|I1LZ84|I1LZ84_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37816 PE,72.2,0,Sigma2
domain of RNA polymerase sigma factors,RNA polymerase sigma factor,
region 2; Sigma3 and sigm,CUFF.53640.1
(1710 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN825552 weakly similar to UniRef100_A7PT61 Cluster: Ch... 1419 0.0
gnl|LJGI|TC61598 weakly similar to UniRef100_Q9LD95 Cluster: Sig... 805 0.0
gnl|LJGI|TC68761 similar to UniRef100_A7PT61 Cluster: Chromosome... 347 1e-94
>gnl|LJGI|CN825552 weakly similar to UniRef100_A7PT61 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 717
Score = 1419 bits (716), Expect = 0.0
Identities = 716/716 (100%)
Strand = Plus / Plus
Query: 827 ctcagttgattgttcagatacaggacttactgaaattggaagaattgaagaccagtcttc 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctcagttgattgttcagatacaggacttactgaaattggaagaattgaagaccagtcttc 61
Query: 887 aatctcaatttgggagagaaccaactatggctgaatgggctgagggtgcaggacttaaat 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatctcaatttgggagagaaccaactatggctgaatgggctgagggtgcaggacttaaat 121
Query: 947 gtcgagcgctgcaaatgaagcttcgttgtggcaacagaagcagagaaaagctgattaaag 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcgagcgctgcaaatgaagcttcgttgtggcaacagaagcagagaaaagctgattaaag 181
Query: 1007 caaatttgcgcatggtactccatgttgctaaaacttaccaggggcgtggtctcagccttc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caaatttgcgcatggtactccatgttgctaaaacttaccaggggcgtggtctcagccttc 241
Query: 1067 aggacttattacaggagggaagtatgggtcttttgaagagtgttaaaaagtttaagcccc 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggacttattacaggagggaagtatgggtcttttgaagagtgttaaaaagtttaagcccc 301
Query: 1127 aagtgggttgccgatttggtagttatgcatattggtggataaagcaagcaataaggaagg 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagtgggttgccgatttggtagttatgcatattggtggataaagcaagcaataaggaagg 361
Query: 1187 ccatatttcatcattcgaggacaatccgtttgccggaaaaggtatatacccagttgggca 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccatatttcatcattcgaggacaatccgtttgccggaaaaggtatatacccagttgggca 421
Query: 1247 aaatattggaggcaaagaaattatacattcaagagggcaatcttcgcccaaccaaagaag 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaatattggaggcaaagaaattatacattcaagagggcaatcttcgcccaaccaaagaag 481
Query: 1307 atttggcaagaagggtaggaatttcagaagacaagatttccagtttgctatatgttgcca 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atttggcaagaagggtaggaatttcagaagacaagatttccagtttgctatatgttgcca 541
Query: 1367 gaattccaatgtctatgcagcaaactgtatggactgaccaaaatacaactttccaggaga 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattccaatgtctatgcagcaaactgtatggactgaccaaaatacaactttccaggaga 601
Query: 1427 ttactgcagacacttcaatcgagtccccagatagtagcgtttcaaaagagcttatgaggc 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttactgcagacacttcaatcgagtccccagatagtagcgtttcaaaagagcttatgaggc 661
Query: 1487 ggcatgtgctcaatctactaagcacgctacgcccgaaagaaaggaggataatccgg 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggcatgtgctcaatctactaagcacgctacgcccgaaagaaaggaggataatccgg 717
>gnl|LJGI|TC61598 weakly similar to UniRef100_Q9LD95 Cluster: Sigma factor-like
protein; n=2; Arabidopsis thaliana|Rep: Sigma factor-like
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(24%)
Length = 737
Score = 805 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Plus
Query: 1305 agatttggcaagaagggtaggaatttcagaagacaagatttccagtttgctatatgttgc 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agatttggcaagaagggtaggaatttcagaagacaagatttccagtttgctatatgttgc 61
Query: 1365 cagaattccaatgtctatgcagcaaactgtatggactgaccaaaatacaactttccagga 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cagaattccaatgtctatgcagcaaactgtatggactgaccaaaatacaactttccagga 121
Query: 1425 gattactgcagacacttcaatcgagtccccagatagtagcgtttcaaaagagcttatgag 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gattactgcagacacttcaatcgagtccccagatagtagcgtttcaaaagagcttatgag 181
Query: 1485 gcggcatgtgctcaatctactaagcacgctacgcccgaaagaaaggaggataatccggct 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcggcatgtgctcaatctactaagcacgctacgcccgaaagaaaggaggataatccggct 241
Query: 1545 aagatttggttttgaggatggagaacaaaaatctttatcagaagttggagagatatttgg 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagatttggttttgaggatggagaacaaaaatctttatcagaagttggagagatatttgg 301
Query: 1605 tttgtccaaggaaagggtccgtcagttggagaaccgcgcgttctacaagctcaagaagtg 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tttgtccaaggaaagggtccgtcagttggagaaccgcgcgttctacaagctcaagaagtg 361
Query: 1665 ccttgcaagccaaggacttgatgcttatgcagacttgcttgtatag 1710
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccttgcaagccaaggacttgatgcttatgcagacttgcttgtatag 407
>gnl|LJGI|TC68761 similar to UniRef100_A7PT61 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 961
Score = 347 bits (175), Expect = 1e-94
Identities = 730/911 (80%), Gaps = 3/911 (0%)
Strand = Plus / Plus
Query: 802 aaacttttgcctattgaagaagagtctcagttgattgttcagatacaggacttactgaaa 861
||||||||| | |||||||||||||||| |||||| |||||||||| | || | | |
Sbjct: 2 aaacttttgacctttgaagaagagtctcaattgatttctcagatacagaatttgttcaga 61
Query: 862 ttggaagaattgaagaccagtcttcaatctcaatttgggagagaaccaactatggctgaa 921
||||||||| |||||| ||| ||||||||||| |||||| | ||||||||||||||||||
Sbjct: 62 ttggaagaagtgaagatcaggcttcaatctcagtttgggcgtgaaccaactatggctgaa 121
Query: 922 tgggctgagggtgcaggacttaaatgtcgagcgctgcaaatgaagcttcgttgtggcaac 981
||||| || |||| || |||| ||| || ||||| | |||||||| || | ||
Sbjct: 122 tgggcagatggtgtgggtcttagctgttatgccctgcagacacagcttcgtagttggtac 181
Query: 982 a-gaagcagagaaaagctgattaaagcaaatttgcgcatggtactccatgttgctaaaac 1040
| |||||| |||||||||||| | || ||||| ||||||||| | |||||||||||||
Sbjct: 182 aagaagcaaggaaaagctgattcatgccaatttacgcatggtagttcatgttgctaaaaa 241
Query: 1041 ttaccaggggcgtggtctcagccttcaggacttattacaggagggaagtatgggtctttt 1100
||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct: 242 ttatctggggcgtggtctcagctttcaggacttattgcaggagggaagtatgggtctcat 301
Query: 1101 gaagagtgttaaaaagtttaagccccaagtgggttgccgatttggtagttatgcatattg 1160
|||||| ||| |||||||||| ||||||| |||||||| || | | ||| || || ||
Sbjct: 302 gaagagcgttgaaaagtttaaaccccaagctggttgccggttcgcttcttacgcttactg 361
Query: 1161 gtggataaagcaagcaataaggaaggccatatttcatcattcgaggacaatccgtttgcc 1220
|||||||| |||| ||||||||| |||| |||||| ||||| ||||| |||||| | ||
Sbjct: 362 gtggataaggcaaacaataaggagggccttatttctacattctaggacgatccgtcttcc 421
Query: 1221 ggaaaaggtatatacccagttgggcaaaatattggaggcaaagaaattatacattcaaga 1280
||| || || || |||| |||||||| | | || ||||||||||| |||| | |||
Sbjct: 422 ggagaatgtttacacccttttgggcaagctcatcgaagcaaagaaattctacaatagaga 481
Query: 1281 gggcaatcttcgcccaaccaaagaagatttggcaagaagggtaggaatttcagaagacaa 1340
|| ||| ||| ||| || |||||||| || ||||||| ||||| || ||| ||||||
Sbjct: 482 aggaaatgttcaccccacaaaagaagaattagcaagaaaaataggagttacagtagacaa 541
Query: 1341 gatttccagtttgctatatgttgccagaattccaatgtctatgcagcaaactgtatggac 1400
| | | ||||||| || ||||||||||||| | || ||||||||||| || |||||
Sbjct: 542 gttggaaatattgctatctgctgccagaattccactttcgatgcagcaaacggtgtggac 601
Query: 1401 tgaccaaaatacaactttccaggagattactgcagacacttcaatcgagtccccagat-a 1459
||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 602 agaccaggatacaacttaccaggagattactgcagacaccgcaattgagaccccagatgt 661
Query: 1460 gtagcgtttcaaaagagcttatgaggcggcatgtgctcaatctactaagcacgctacgcc 1519
||| ||| ||||| |||| |||||||| || | || ||| || ||| || || ||
Sbjct: 662 gta-tgttgcaaaacagctaatgaggcgtcacgcgcgcaaccttctacataccttaaacc 720
Query: 1520 cgaaagaaaggaggataatccggctaagatttggttttgaggatggagaacaaaaatctt 1579
| | |||||||||||||||| ||||||||||||| |||| ||||| | | |||||||
Sbjct: 721 caagagaaaggaggataatcaggctaagatttggcattgaagatggctacgagaaatctt 780
Query: 1580 tatcagaagttggagagatatttggtttgtccaaggaaagggtccgtcagttggagaacc 1639
| |||||| |||| ||||||||||||| ||||| |||||||| |||||||||| ||
Sbjct: 781 tgtcagaaattggcactgtatttggtttgtctaaggagagggtccgacagttggagagcc 840
Query: 1640 gcgcgttctacaagctcaagaagtgccttgcaagccaaggacttgatgcttatgcagact 1699
| || || | ||||||||| |||||||||| || || ||||||||||| |||||| |||
Sbjct: 841 gagcattggataagctcaagcagtgccttgctagtcatggacttgatgcatatgcaaact 900
Query: 1700 tgcttgtatag 1710
|||||||||||
Sbjct: 901 tgcttgtatag 911