Miyakogusa Predicted Gene
- Lj5g3v0658240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0658240.1 Non Chatacterized Hit- tr|K4ALK8|K4ALK8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si039789,38.58,1e-18,Myb_DNA-bind_3,Myb/SANT-like domain;
seg,NULL,CUFF.53634.1
(837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82256 weakly similar to UniRef100_A7PNI5 Cluster: Chr... 597 e-170
gnl|LJGI|BP068353 similar to UniRef100_Q03VT3 Cluster: Na+-drive... 159 3e-38
>gnl|LJGI|TC82256 weakly similar to UniRef100_A7PNI5 Cluster: Chromosome chr1
scaffold_22, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_22, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1328
Score = 597 bits (301), Expect = e-170
Identities = 328/337 (97%)
Strand = Plus / Plus
Query: 7 aacaacaaaagagagaaatacattatggataactcaaaggctacatgggattttcaagca 66
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aacaacaaaagagagaaagccattatggataactcaaaggctacatgggattttcaagca 777
Query: 67 actaagttgtatgtcaaattatgtttggctgaacatcataaaggggaacgtttaggatcc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 actaagttgtatgtcaaattatgtttggctgaacatcataaaggggaacgtttaggatcc 837
Query: 127 agctttacaaagaaagggtggatatctattttaaccaaatttaatgcatcaactggaaga 186
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 aactttacaaagaaagggtggatatctattttaaccaaatttaatgcatcaactggaaga 897
Query: 187 aattatgataagcccaagttaaaaaacaaatgggataattttagaagggagtggcaagca 246
|||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct: 898 aattatgataagcccaagttaaaaaacaaatgagataattttaagagggagtgccaagca 957
Query: 247 tggtacaagttatttgaaaaggaaacaggtttgggatgggataaggcaaagaataccgta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 958 tggtacaagttatttgaaaaggaaacaggtttgggatgggataaggcaaagaatatcgta 1017
Query: 307 gatgctccagatgaatggtgggagaaaaagcaattgg 343
||||| |||||||||||||||||||||||||||||||
Sbjct: 1018 gatgccccagatgaatggtgggagaaaaagcaattgg 1054
Score = 363 bits (183), Expect = 1e-99
Identities = 192/195 (98%)
Strand = Plus / Plus
Query: 342 ggaaaatccactatatggaaaataccgagagaaaggactttcttttggtgaagaactaac 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 ggaaaatccactatatggaaaataccgagagaaaggactttcttttggtgaagaactaac 1193
Query: 402 tattatgtttaaggatgtggtggctacgggaaagtctgcgtgggcacctacttctgggat 461
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1194 tattgtgtttaaggatgtggtggctacgggaaagtctgcatgggcacctacttctgggat 1253
Query: 462 attacctaatgacctaagccaaaatgatgatgtttatcgtccatgcttagagagtgatga 521
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 attacctaatggcctaagccaaaatgatgatgtttatcgtccatgcttagagagtgatga 1313
Query: 522 agaagatagagagga 536
|||||||||||||||
Sbjct: 1314 agaagatagagagga 1328
>gnl|LJGI|BP068353 similar to UniRef100_Q03VT3 Cluster: Na+-driven multidrug efflux
pump; n=1; Leuconostoc mesenteroides subsp.
mesenteroides ATCC, partial (3%)
Length = 506
Score = 159 bits (80), Expect = 3e-38
Identities = 98/104 (94%)
Strand = Plus / Minus
Query: 734 tagctgatgcaataactaagatagtggatgcatctgagtcacgcaccactgctataaaca 793
|||||||||| || ||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 430 tagctgatgctatcactaagatagtggatgcatctgagtcacgcacccctgctatggaca 371
Query: 794 cacttgtagctcccggttcatctattggtgaagttatggctgag 837
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cactcgtagctcccggttcatctattggtgaagttatggctgag 327