Miyakogusa Predicted Gene
- Lj5g3v0641520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0641520.1 Non Chatacterized Hit- tr|I1L909|I1L909_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.96,0,MFS general
substrate transporter,Major facilitator superfamily domain, general
substrate transporte,CUFF.53604.1
(1771 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS342036 weakly similar to UniRef100_A7PHY1 Cluster: Ch... 1142 0.0
gnl|LJGI|FS320478 weakly similar to UniRef100_A7R2B3 Cluster: Ch... 440 e-122
gnl|LJGI|FS337240 similar to UniRef100_Q535K6 Cluster: Nitrate a... 54 3e-06
gnl|LJGI|TC74164 similar to UniRef100_A7PHY1 Cluster: Chromosome... 54 3e-06
>gnl|LJGI|FS342036 weakly similar to UniRef100_A7PHY1 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 665
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atgttgaaaaggatgaagaatttcagtttccacgttctcaccggaagctggttcttggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgttgaaaaggatgaagaatttcagtttccacgttctcaccggaagctggttcttggtc 149
Query: 61 tttgcctctattctaatcatggccttttcaggaacaacctacttgtttggtctctactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tttgcctctattctaatcatggccttttcaggaacaacctacttgtttggtctctactca 209
Query: 121 agccaagtgaaacactctttgggttatgaccaaaccactctgaacctcatcagcttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agccaagtgaaacactctttgggttatgaccaaaccactctgaacctcatcagcttcttc 269
Query: 181 aaagatataggcaccaacgttggaatcgtctcggggctaatcagtcaattcacctctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaagatataggcaccaacgttggaatcgtctcggggctaatcagtcaattcacctctcca 329
Query: 241 tgggtggtcctcgcgattggagccaccatgaacctcgtcggatacttcatggtatggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgggtggtcctcgcgattggagccaccatgaacctcgtcggatacttcatggtatggctc 389
Query: 301 tccgtcacgggacacgtcgtgaagccacaagtgtggcaaatgtgtctctacttttacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tccgtcacgggacacgtcgtgaagccacaagtgtggcaaatgtgtctctacttttacatt 449
Query: 361 ggggctaactcacaggcctttgccggtaccgcggtgctggtgaactgtgttaaaagcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggggctaactcacaggcctttgccggtaccgcggtgctggtgaactgtgttaaaagcttc 509
Query: 421 ccgcaaaaccgaggcagtgtcctcggtcttgccaagggttacatgggtcttagtggcgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccgcaaaaccgaggcagtgtcctcggtcttgccaagggttacatgggtcttagtggcgcc 569
Query: 481 attttcacgcagctctaccatgctttctatggtgacaacctcgatgctctcattctcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 attttcacgcagctctaccatgctttctatggtgacaacctcgatgctctcattctcttc 629
Query: 541 attgcttggcttccggccgccatttgctacgtcttg 576
||||||||||||||||||||||||||||||||||||
Sbjct: 630 attgcttggcttccggccgccatttgctacgtcttg 665
>gnl|LJGI|FS320478 weakly similar to UniRef100_A7R2B3 Cluster: Chromosome undetermined
scaffold_417, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_417, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(19%)
Length = 347
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 1550 ggaaggagttaaattgttcaggagtggagtgttataagatggcttttttcataatcacag 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaggagttaaattgttcaggagtggagtgttataagatggcttttttcataatcacag 60
Query: 1610 catccactttggtaggttgtttttcttctatcgttttggtgttaaggaccaggaagtatt 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catccactttggtaggttgtttttcttctatcgttttggtgttaaggaccaggaagtatt 120
Query: 1670 acaaaagtgtcacatatgaaaagtttagagcagtggaagcagagaaagcagagaccagtg 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaaaagtgtcacatatgaaaagtttagagcagtggaagcagagaaagcagagaccagtg 180
Query: 1730 cagttgctactccagctgccaccaccacaagtcactcgtaaa 1771
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttgctactccagctgccaccaccacaagtcactcgtaaa 222
>gnl|LJGI|FS337240 similar to UniRef100_Q535K6 Cluster: Nitrate and chloride
transporter; n=1; Glycine max|Rep: Nitrate and chloride
transporter - Glycine max (Soybean), partial (39%)
Length = 775
Score = 54.0 bits (27), Expect = 3e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 145 tatgaccaaaccactctgaacctcatcagcttcttcaaagatataggcaccaacgttgg 203
||||||||| ||||||| |||||| |||| ||||||||||| |||| | |||||||||
Sbjct: 230 tatgaccaatccactctcaacctcctcagtttcttcaaagacgtaggtagcaacgttgg 288
>gnl|LJGI|TC74164 similar to UniRef100_A7PHY1 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 557
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 148 gaccaaaccactctgaacctcatcagcttcttcaa 182
|||||||||||||| ||||| ||||||||||||||
Sbjct: 232 gaccaaaccactctcaacctaatcagcttcttcaa 266