Miyakogusa Predicted Gene

Lj5g3v0641470.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0641470.2 Non Chatacterized Hit- tr|I1L8X8|I1L8X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51038 PE,79.58,0,NUCLEAR
PORE COMPLEX PROTEIN NUP160,NULL; Nup160,Nucleoporin Nup120/160;
seg,NULL,CUFF.53610.2
         (4380 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV780415 weakly similar to UniRef100_A7QFQ8 Cluster: Ch...   888   0.0  

>gnl|LJGI|AV780415 weakly similar to UniRef100_A7QFQ8 Cluster: Chromosome undetermined
           scaffold_89, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_89, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (9%)
          Length = 544

 Score =  888 bits (448), Expect = 0.0
 Identities = 457/460 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaactggttggactttggacgcgaaggaagtccccataatcggaagcgacgctgtt 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  atgggaactggttggacttgggacgcgaaggaagtccccataatcggaagcgacgctgtt 144

                                                                       
Query: 61  cgctggatcgacctctccgtcccttcctccgccaacatcgccgtcggcagcggcgccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cgctggatcgacctctccgtcccttcctccgccaacatcgccgtcggcagcggcgccaca 204

                                                                       
Query: 121 cctctcgctcctcccaccaccgacaaccgtgcctcttgctccgccatcggagatcctccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctctcgctcctcccaccaccgacaaccgtgcctcttgctccgccatcggagatcctccc 264

                                                                       
Query: 181 acttaccttatctggagaattcacaaggaccattctcaatctcttgaactgctcgaggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acttaccttatctggagaattcacaaggaccattctcaatctcttgaactgctcgaggtc 324

                                                                       
Query: 241 tctgcttccaaagaatttcctcgtttcgggctcagattcactttccccgacgcgctttgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgcttccaaagaatttcctcgtttcgggctcagattcactttccccgacgcgctttgc 384

                                                                       
Query: 301 cccttcgcgttcatctgcaaaaacgagaatagtggcagttctaggttcccctacttgctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccttcgcgttcatctgcaaaaacgagaatagtggcagttctaggttcccctacttgctt 444

                                                                       
Query: 361 tacgtgttgacagtgtctggcttggcttacctcttgaggattcgaaatgtttctgcatat 420
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 tacgtgttgacagtgtctggcttggcttacctcttgaggattcgaaatgtgtctgcatat 504

                                                   
Query: 421 gcgtcgtgttctattatccctgtggatgagctattcgagt 460
           ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 gcgtcgtgtactattatccctgtggatgagctattcgagt 544