Miyakogusa Predicted Gene

Lj5g3v0641390.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0641390.1 Non Chatacterized Hit- tr|G6FW75|G6FW75_9CYAN
Putative uncharacterized protein OS=Fischerella sp.
JS,47.9,1e-17,seg,NULL; DUF4079,Protein of unknown function
DUF4079,CUFF.53594.1
         (357 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69277 similar to UniRef100_A7QJG2 Cluster: Chromosome...   708   0.0  

>gnl|LJGI|TC69277 similar to UniRef100_A7QJG2 Cluster: Chromosome chr8 scaffold_106,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_106, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 1356

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtggctatggtacctatctgggttttcgcattcgatactctgatgatgtggaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atgggtggctatggtacctatctgggttttcgcattcgatactctgatgatgtggaggaa 579

                                                                       
Query: 61  aaggctaaggctaaggacttgcatcccaagcttttagctgggatgtttttcttctttgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaggctaaggctaaggacttgcatcccaagcttttagctgggatgtttttcttctttgct 639

                                                                       
Query: 121 cttggagctaccggtggagtaacatctctactcacatctgataaaccaatttttgaaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cttggagctaccggtggagtaacatctctactcacatctgataaaccaatttttgaaagt 699

                                                                       
Query: 181 cctcatgctgttactggcgccattggccttgctttgttgacagtacaaactatactgccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cctcatgctgttactggcgccattggccttgctttgttgacagtacaaactatactgccc 759

                                                                       
Query: 241 acactgtttgagggaaatcctggactaaggagtgttcatgggatcttgggtagtagtatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acactgtttgagggaaatcctggactaaggagtgttcatgggatcttgggtagtagtatc 819

                                                                    
Query: 301 atgacactctttctcattcatgctgcccttggacttcaattaggcctcagttcctaa 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 atgacactctttctcattcatgctgcccttggacttcaattaggcctcagttcctaa 876