Miyakogusa Predicted Gene
- Lj5g3v0626910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0626910.1 Non Chatacterized Hit- tr|I1L8V1|I1L8V1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82,0,ZF_RING_2,Zinc
finger, RING-type; RING/U-box,NULL; Ring finger,Zinc finger,
RING-type; no descriptio,CUFF.53569.1
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81976 similar to UniRef100_Q2HV40 Cluster: Zinc finge... 1933 0.0
gnl|LJGI|TC70383 similar to UniRef100_Q2HV40 Cluster: Zinc finge... 839 0.0
gnl|LJGI|TC79982 similar to UniRef100_A7PT26 Cluster: Chromosome... 404 e-112
>gnl|LJGI|TC81976 similar to UniRef100_Q2HV40 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (72%)
Length = 1534
Score = 1933 bits (975), Expect = 0.0
Identities = 1028/1050 (97%), Gaps = 11/1050 (1%)
Strand = Plus / Plus
Query: 1 atgggtaacgttggaagtagcggcgctaaccaccgccggagacacggcggaagcggaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgggtaacgttggaagtagcggcgctaaccaccgccggagacacggcggaagcggaagc 496
Query: 61 ggccgaaggattcatccgccacctcacccgccggtggcgccgcagccggaaatcgcggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggccgaaggattcatccgccacctcacccgccggtggcgccgcagccggaaatcgcggct 556
Query: 121 aatcggtttgtgtaccctgctgccgccacgccgtatcataactacccaggttactatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aatcggtttgtgtaccctgctgccgccacgccgtatcataactacccaggttactatccc 616
Query: 181 ccgccgccgacaaccgtgccggtgcctttgccggcaccgtatgaccaccatcaccgtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccgccgccgacaaccgtgccggtgcctttgccggcaccgtatgaccaccatcaccgtcct 676
Query: 241 ccgatggacccaatgtgggggtgttatcaggcgccgctgccacctgcgccgtatgtggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccgatggacccaatgtgggggtgttatcaggcgccgctgccacctgcgccgtatgtggag 736
Query: 301 caacgggaagcggttactataaagaatgatgtcaatgttaagaaggagaccctgaagatt 360
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 737 caacgggaagcggttactataaagaatgatgtcaatgttatgtttgagaccctgaagatt 796
Query: 361 gtgcctgatgaggaaaatccaggacacttccttgtgtcattcacttttgatgccactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gtgcctgatgaggaaaatccaggacacttccttgtgtcattcacttttgatgccactgtt 856
Query: 421 tctgggagtgttaccgtacnnnnnnncgcaaaagaaggtgaaggttgcatccttacccca 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 857 tctgggagtgttaccgtactttttttcgcaaaagaaggtgaaggttgcatccttacccca 916
Query: 481 atgaaggaaaacgttcttccacccgtgaccgtaaatttccagcaaggtcttggccagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 atgaaggaaaacgttcttccacccgtgaccgtaaatttccagcaaggtcttggccagaag 976
Query: 541 tttagacaaccagctggaactggtatcaaattttcagagtttgacgaagctgagttgttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tttagacaaccagctggaactggtatcaaattttcagagtttgacgaagctgagttgttg 1036
Query: 601 aaagtgggggacatggatgtctatcctgtagcagttaaagcagatgcatcctctggcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 aaagtgggggacatggatgtctatcctgtagcagttaaagcagatgcatcctctggcgac 1096
Query: 661 catgatggatcagaagaaactccagcatctggtaacacaaactctcagataactcaagca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 catgatggatcagaagaaactccagcatctggtaacacaaactctcagataactcaagca 1156
Query: 721 gtgtttgagaaggagaaaggagaattccgggtgaaggttgttaagcagattttgtgggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 gtgtttgagaaggagaaaggagaattccgggtgaaggttgttaagcagattttgtgggtg 1216
Query: 781 aatgggatgaggtatgagctgcaggagatatatggtattggaaattcaatggagagtgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 aatgggatgaggtatgagctgcaggagatatatggtattggaaattcaatggagagtgac 1276
Query: 841 ttggatgggaatgacccaggaaaagagtgtgttatctgcttgtcagagcctcgggacaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 ttggatgggaatgacccaggaaaagagtgtgttatctgcttgtcagagcctcgggacaca 1336
Query: 901 actgtcctcccatgccgccatatgtgcatgtgtagtggatgtgcaaaggttttgaggttc 960
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1337 actgtcctcccatgccgccatat-----------gtggatgtgcaaaggttttgaggttc 1385
Query: 961 cagacaaatagatgtccaatctgcagacaaccagttgagaggcttttggagatcaaagtt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 cagacaaatagatgtccaatctgcagacaaccagttgagaggcttttggagatcaaagtt 1445
Query: 1021 aggcctgagcctactgagcctgaggaatga 1050
||||||||||||||||||||||||||||||
Sbjct: 1446 aggcctgagcctactgagcctgaggaatga 1475
>gnl|LJGI|TC70383 similar to UniRef100_Q2HV40 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (38%)
Length = 670
Score = 839 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Plus
Query: 624 tcctgtagcagttaaagcagatgcatcctctggcgaccatgatggatcagaagaaactcc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcctgtagcagttaaagcagatgcatcctctggcgaccatgatggatcagaagaaactcc 74
Query: 684 agcatctggtaacacaaactctcagataactcaagcagtgtttgagaaggagaaaggaga 743
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 agcatttggtaacacaaactctcagataactcaagcagtgtttgagaaggagaaaggaga 134
Query: 744 attccgggtgaaggttgttaagcagattttgtgggtgaatgggatgaggtatgagctgca 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 attccgggtgaaggttgttaagcagattttgtgggtgaatgggatgaggtatgagctgca 194
Query: 804 ggagatatatggtattggaaattcaatggagagtgacttggatgggaatgacccaggaaa 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggagatatatggtattggaaattcaatggagagtgacttggatgggaatgacccaggaaa 254
Query: 864 agagtgtgttatctgcttgtcagagcctcgggacacaactgtcctcccatgccgccatat 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agagtgtgttatctgcttgtcagagcctcgggacacaactgtcctcccatgccgccatat 314
Query: 924 gtgcatgtgtagtggatgtgcaaaggttttgaggttccagacaaatagatgtccaatctg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtgcatgtgtagtggatgtgcaaaggttttgaggttccagacaaatagatgtccaatctg 374
Query: 984 cagacaaccagttgagaggcttttggagatcaaagttaggcctgagcctactgagcctga 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cagacaaccagttgagaggcttttggagatcaaagttaggcctgagcctactgagcctga 434
Query: 1044 ggaatga 1050
|||||||
Sbjct: 435 ggaatga 441
>gnl|LJGI|TC79982 similar to UniRef100_A7PT26 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 507
Score = 404 bits (204), Expect = e-112
Identities = 210/212 (99%)
Strand = Plus / Plus
Query: 821 gaaattcaatggagagtgacttggatgggaatgacccaggaaaagagtgtgttatctgct 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gaaattcaatggagagtgacttggatgggaatgacccaggaaaagagtgtgttatttgct 60
Query: 881 tgtcagagcctcgggacacaactgtcctcccatgccgccatatgtgcatgtgtagtggat 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcagagcctcgggacacaactgtcctcccatgccgccatatgtgcatgtgtagtggat 120
Query: 941 gtgcaaaggttttgaggttccagacaaatagatgtccaatctgcagacaaccagttgaga 1000
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 gtgcaaaggttttgaggttccagacaaatagatgtccaatttgcagacaaccagttgaga 180
Query: 1001 ggcttttggagatcaaagttaggcctgagcct 1032
||||||||||||||||||||||||||||||||
Sbjct: 181 ggcttttggagatcaaagttaggcctgagcct 212