Miyakogusa Predicted Gene
- Lj5g3v0626690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0626690.1 tr|D8TW33|D8TW33_VOLCA Qc-SNARE, SYP7-family
OS=Volvox carteri GN=syp71 PE=4
SV=1,46.88,0.000000000003,T_SNARE,Target SNARE coiled-coil domain;
seg,NULL; SYNTAXIN,Syntaxin/epimorphin, conserved site; no
,CUFF.53563.1
(801 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61064 similar to UniRef100_A7PT16 Cluster: Chromosome... 1588 0.0
gnl|LJGI|GO025941 similar to UniRef100_A7PT16 Cluster: Chromosom... 458 e-128
gnl|LJGI|GO025368 similar to UniRef100_A7PT16 Cluster: Chromosom... 400 e-111
gnl|LJGI|DC596145 similar to UniRef100_A7PT16 Cluster: Chromosom... 371 e-102
gnl|LJGI|TC68657 similar to UniRef100_A7PT16 Cluster: Chromosome... 176 1e-43
gnl|LJGI|AV770244 similar to UniRef100_A7PT16 Cluster: Chromosom... 155 5e-37
>gnl|LJGI|TC61064 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1244
Score = 1588 bits (801), Expect = 0.0
Identities = 801/801 (100%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 218
Query: 61 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 278
Query: 121 gccaccgtcgacgccgacatcgaggcactcaatcagaaagctgaaactgcttctaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gccaccgtcgacgccgacatcgaggcactcaatcagaaagctgaaactgcttctaaggag 338
Query: 181 aaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaaggctaggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaaggctaggttg 398
Query: 241 cttgaagaagttcccaagttgcagaaattggctgtcaaaaaggtaaaggggctttcatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cttgaagaagttcccaagttgcagaaattggctgtcaaaaaggtaaaggggctttcatcg 458
Query: 301 caagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 caagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctatc 518
Query: 361 ccagatgggactcctgctgcgccaaaacaaactggaggctgggcatcttcgggctcacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ccagatgggactcctgctgcgccaaaacaaactggaggctgggcatcttcgggctcacgt 578
Query: 421 ccggatattaagtttgattctgatgggcgatttgatgacgaatacttccaacaaactgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ccggatattaagtttgattctgatgggcgatttgatgacgaatacttccaacaaactgag 638
Query: 481 gaatcaagtcgattcaggaacgaatatgaaatgcgtagaataaaacaggatcaaggtttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaatcaagtcgattcaggaacgaatatgaaatgcgtagaataaaacaggatcaaggtttg 698
Query: 541 gatgtgattgcagaagggttggatacattgaaagacatggcacatgatatgaatgaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gatgtgattgcagaagggttggatacattgaaagacatggcacatgatatgaatgaggaa 758
Query: 601 ctggatagacaagttccactgatggatgagattgacactaaggtggaccaggcagcatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ctggatagacaagttccactgatggatgagattgacactaaggtggaccaggcagcatct 818
Query: 661 gaccttaagaataccaatgttagacttaaagacacagttatccagcttcggtccagtcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gaccttaagaataccaatgttagacttaaagacacagttatccagcttcggtccagtcga 878
Query: 721 aatttctgcatcgatattgttttgttgattataattctgggaattgctgcctacttatac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 aatttctgcatcgatattgttttgttgattataattctgggaattgctgcctacttatac 938
Query: 781 aatgtattaaagaaatgaata 801
|||||||||||||||||||||
Sbjct: 939 aatgtattaaagaaatgaata 959
>gnl|LJGI|GO025941 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 554
Score = 458 bits (231), Expect = e-128
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 219
Query: 61 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 279
Query: 121 gccaccgtcgacgccgacatcgaggcactcaatcagaaagctgaaactgcttctaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gccaccgtcgacgccgacatcgaggcactcaatcagaaagctgaaactgcttctaaggag 339
Query: 181 aaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaag 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaag 390
Score = 325 bits (164), Expect = 2e-88
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 301 caagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 caagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctatc 446
Query: 361 ccagatgggactcctgctgcgccaaaacaaactggaggctgggcatcttcgggctcacgt 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 447 ccagatgggactcctgctgcgccaaaacaaactggaggctgggtatcttcgggctcacgt 506
Query: 421 ccggatattaagtttgattctgatgggcgatttgatgacgaatacttc 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccggatattaagtttgattctgatgggcgatttgatgacgaatacttc 554
>gnl|LJGI|GO025368 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 664
Score = 400 bits (202), Expect = e-111
Identities = 205/206 (99%)
Strand = Plus / Plus
Query: 596 aggaactggatagacaagttccactgatggatgagattgacactaaggtggaccaggcag 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aggaactggatagacaagttccactgatggatgagattgacactaaggtggaccaggcag 376
Query: 656 catctgaccttaagaataccaatgttagacttaaagacacagttatccagcttcggtcca 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 catctgaccttaagaataccaatgttagacttaaagacacagttatccagcttcggtcca 436
Query: 716 gtcgaaatttctgcatcgatattgttttgttgattataattctgggaattgctgcctact 775
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 437 gtcgaaatttctgcatcgatattgttttgttgattataattctgggaattactgcctact 496
Query: 776 tatacaatgtattaaagaaatgaata 801
||||||||||||||||||||||||||
Sbjct: 497 tatacaatgtattaaagaaatgaata 522
Score = 301 bits (152), Expect = 3e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 219
Query: 61 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 279
Query: 121 gccaccgtcgacgccgacatcgaggcactcaa 152
||||||||||||||||||||||||||||||||
Sbjct: 280 gccaccgtcgacgccgacatcgaggcactcaa 311
>gnl|LJGI|DC596145 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 553
Score = 371 bits (187), Expect = e-102
Identities = 423/499 (84%), Gaps = 2/499 (0%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 60
||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 47 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 106
Query: 61 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 120
||| |||| || || ||||| |||||||||||||| | || |||| |||||||
Sbjct: 107 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 166
Query: 121 gccaccgtcgacgccgacatcgaggcactcaat-cagaaagctgaaactgcttctaagga 179
| | |||||||||||||||| || || | || | |||||||| ||||| ||||| || |
Sbjct: 167 ggcgccgtcgacgccgacattgacgc-cgcacttcagaaagcagaaaccgcttccaatgg 225
Query: 180 gaaaggtaaggcttctgctgtagcgatcaatgcggagattcgtcgaaccaaggctaggtt 239
|||| || ||| || |||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 226 gaaaaatagggcatcaactgtagcgatcaatgctgagattcgtcgcactaaggctaggtt 285
Query: 240 gcttgaagaagttcccaagttgcagaaattggctgtcaaaaaggtaaaggggctttcatc 299
||| || || || ||||| ||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 286 gctggatgaggtgcccaaattgcagaggttggctgtaaaaaaggtaaaagggctttcgtc 345
Query: 300 gcaagaatttgctgcccgtaatgatttggttcttgcattgccggagagaatccaagctat 359
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 346 acaagaatttgctgcccgtaatgatttagttcttgcattgccggagaggatccaagcgat 405
Query: 360 cccagatgggactcctgctgcgccaaaacaaactggaggctgggcatcttcgggctcacg 419
||||||||||| |||||||| || |||||| |||||||||||||| |||| ||||||||
Sbjct: 406 tccagatgggacccctgctgcacccaaacaagctggaggctgggcagcttcaggctcacg 465
Query: 420 tccggatattaagtttgattctgatgggcgatttgatgacgaatacttccaacaaactga 479
|| || ||||| |||||||| |||||||||||||||| ||||||||||||||||| ||
Sbjct: 466 ccctgaaattaaatttgattcgaatgggcgatttgatgatgaatacttccaacaaacaga 525
Query: 480 ggaatcaagtcgattcagg 498
|||||||||| |||||||
Sbjct: 526 agaatcaagtcaattcagg 544
>gnl|LJGI|TC68657 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 540
Score = 176 bits (89), Expect = 1e-43
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 197 ctgtagcgatcaatgcggagattcgtcgaaccaaggctaggttgcttgaagaagttccca 256
|||||||||||||||| ||||||||||| || |||||||||||||| || || || ||||
Sbjct: 392 ctgtagcgatcaatgctgagattcgtcgcactaaggctaggttgctggatgaggtgccca 451
Query: 257 agttgcagaaattggctgtcaaaaaggtaaaggggctttcatcgcaagaatttgctgccc 316
| ||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct: 452 aattgcagaggttggctgtaaaaaaggtaaaagggctttcgtcacaagaatttgctgccc 511
Query: 317 gtaatgatttggttcttgcattgccggag 345
|||||||||| ||||||||||||||||||
Sbjct: 512 gtaatgatttagttcttgcattgccggag 540
Score = 87.7 bits (44), Expect = 1e-16
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 1 atgagcgtcatcgaccttctaaccagagttgacaccatttgcaacaagtacgacaaatac 60
||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 118 atgagcgtcatcgacattctcaccagagttgattccattgttaacaagtacgacaaatac 177
Query: 61 gacgtcgaacgccaccgtgaatccaacctctccggcgacgatgcatttgccagactctac 120
||| |||| || || ||||| |||||||||||||| | || |||| |||||||
Sbjct: 178 gacatcgataagcaaaaagattccaatgtctccggcgacgatcccttcgccaaactctac 237
Query: 121 gccaccgtcgacgccgacat 140
||| ||||||||||||||||
Sbjct: 238 gccgccgtcgacgccgacat 257
>gnl|LJGI|AV770244 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 380
Score = 155 bits (78), Expect = 5e-37
Identities = 141/162 (87%)
Strand = Plus / Minus
Query: 637 actaaggtggaccaggcagcatctgaccttaagaataccaatgttagacttaaagacaca 696
|||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | |||
Sbjct: 376 actaaggtggaccaggcatcatctgaccttaagcatacccatgttagacttaaacataca 317
Query: 697 gttatccagcttcggtccagtcgaaatttctgcatcgatattgttttgttgattataatt 756
|| | || |||||| ||| |||| || ||||| |||||||||| |||||||||||| |||
Sbjct: 316 gtgaccccgcttcgatcccgtcgcaagttctgtatcgatattggtttgttgattatcatt 257
Query: 757 ctgggaattgctgcctacttatacaatgtattaaagaaatga 798
|||||||||||||||| || ||| |||| || |||||||||
Sbjct: 256 ttgggaattgctgcctatttgtaccatgtcttgaagaaatga 215