Miyakogusa Predicted Gene

Lj5g3v0626520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0626520.1 tr|H0Z2A4|H0Z2A4_TAEGU Importin subunit alpha
OS=Taeniopygia guttata GN=LOC100225998 PE=3
SV=1,26.09,0.000000002,Armadillo/beta-catenin-like repeats,Armadillo;
ARM repeat,Armadillo-type fold; IMPORTIN ALPHA,NULL; ,CUFF.53559.1
         (1365 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011869 similar to UniRef100_A7PT00 Cluster: Chromosom...   385   e-106

>gnl|LJGI|GO011869 similar to UniRef100_A7PT00 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (41%)
          Length = 756

 Score =  385 bits (194), Expect = e-106
 Identities = 197/198 (99%)
 Strand = Plus / Plus

                                                                        
Query: 987  aggtaatctcattgctggtgattcccattcaactaatgttgttcttgtacctggacttga 1046
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    aggtaatttcattgctggtgattcccattcaactaatgttgttcttgtacctggacttga 61

                                                                        
Query: 1047 aattacagataatgccataaaagtcctgataaaatgtctgaatggcgaacactgtgtctt 1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   aattacagataatgccataaaagtcctgataaaatgtctgaatggcgaacactgtgtctt 121

                                                                        
Query: 1107 aaagaaggaagcagcctgggtgctgtctaatatagctgctggttctgttgagcacaagca 1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  aaagaaggaagcagcctgggtgctgtctaatatagctgctggttctgttgagcacaagca 181

                              
Query: 1167 gctgatatattctagtga 1184
            ||||||||||||||||||
Sbjct: 182  gctgatatattctagtga 199



 Score =  367 bits (185), Expect = e-100
 Identities = 185/185 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1181 gtgatgagaagccaaatctgatcctggagcacctggtttcacttgttcaaaaaggatgtt 1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gtgatgagaagccaaatctgatcctggagcacctggtttcacttgttcaaaaaggatgtt 360

                                                                        
Query: 1241 tacctggatttattggtttgattagatctgctgatattgaagctgctaggctaggacttc 1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tacctggatttattggtttgattagatctgctgatattgaagctgctaggctaggacttc 420

                                                                        
Query: 1301 agtttgtagagctggttctgagggggatgccaaatggtgaggggccaaagcttgttgaat 1360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  agtttgtagagctggttctgagggggatgccaaatggtgaggggccaaagcttgttgaat 480

                 
Query: 1361 gtgaa 1365
            |||||
Sbjct: 481  gtgaa 485