Miyakogusa Predicted Gene

Lj5g3v0616300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0616300.1 Non Chatacterized Hit- tr|I1L8R9|I1L8R9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54262
PE,76.58,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR_3,,CUFF.53523.1
         (2224 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70033 homologue to UniRef100_A7PSR9 Cluster: Chromoso...   797   0.0  
gnl|LJGI|AV410011 similar to UniRef100_A7PSR9 Cluster: Chromosom...   779   0.0  

>gnl|LJGI|TC70033 homologue to UniRef100_A7PSR9 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 606

 Score =  797 bits (402), Expect = 0.0
 Identities = 402/402 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1823 ggaatgaagtgaaggagaggtgggaggcaggaagggatagggaaaactctgactcttctg 1882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4    ggaatgaagtgaaggagaggtgggaggcaggaagggatagggaaaactctgactcttctg 63

                                                                        
Query: 1883 ttcctccattgaaacctgatgaggggcttttggatactcttgctgatatctgtgtgaggg 1942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   ttcctccattgaaacctgatgaggggcttttggatactcttgctgatatctgtgtgaggg 123

                                                                        
Query: 1943 ctgcatttttcagaaaggccttggaaattgtggcgtgcatggaagagaatgggatacctc 2002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124  ctgcatttttcagaaaggccttggaaattgtggcgtgcatggaagagaatgggatacctc 183

                                                                        
Query: 2003 caaataagaccaagtttactagaatctatgtggaaatgcattcaagaatgtttactagta 2062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184  caaataagaccaagtttactagaatctatgtggaaatgcattcaagaatgtttactagta 243

                                                                        
Query: 2063 agcatgcttcaagggctaggcaagacaggagagtggagaggaaaagggcagctgaggctt 2122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244  agcatgcttcaagggctaggcaagacaggagagtggagaggaaaagggcagctgaggctt 303

                                                                        
Query: 2123 ttaagttttggctgggtttgcctaattcttactatggaagtgagtggcgattagaaccta 2182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304  ttaagttttggctgggtttgcctaattcttactatggaagtgagtggcgattagaaccta 363

                                                      
Query: 2183 ttgatggatatggatctggctctgattctgattctgtttagt 2224
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364  ttgatggatatggatctggctctgattctgattctgtttagt 405


>gnl|LJGI|AV410011 similar to UniRef100_A7PSR9 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 393

 Score =  779 bits (393), Expect = 0.0
 Identities = 393/393 (100%)
 Strand = Plus / Plus

                                                                        
Query: 722  ctcagtttggtgttgtgcctgatgcgttgagttataacattgtcatgaagctgtgttgta 781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctcagtttggtgttgtgcctgatgcgttgagttataacattgtcatgaagctgtgttgta 60

                                                                        
Query: 782  gaaaggataggaaagacttgcttgtgtttgtgttggagaggattcttgagcagaatgtac 841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gaaaggataggaaagacttgcttgtgtttgtgttggagaggattcttgagcagaatgtac 120

                                                                        
Query: 842  ctttgtgtatgactactttgcattccttggttgctgcttatgttgattttggcgatttag 901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctttgtgtatgactactttgcattccttggttgctgcttatgttgattttggcgatttag 180

                                                                        
Query: 902  atacggctgagataatagttcaggcaatgagggagaagaggagagatctttgtaggatac 961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atacggctgagataatagttcaggcaatgagggagaagaggagagatctttgtaggatac 240

                                                                        
Query: 962  tgagggagtccaattcagagtatataggtggaaagaatgattctgtttttcagaagttgc 1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgagggagtccaattcagagtatataggtggaaagaatgattctgtttttcagaagttgc 300

                                                                        
Query: 1022 ttcctaattcgatgaatcagagtggcaacggcaatggtggtggtgtctatcagcctcctt 1081
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttcctaattcgatgaatcagagtggcaacggcaatggtggtggtgtctatcagcctcctt 360

                                             
Query: 1082 tgttgccaaaaccatatactcctaacactagaa 1114
            |||||||||||||||||||||||||||||||||
Sbjct: 361  tgttgccaaaaccatatactcctaacactagaa 393