Miyakogusa Predicted Gene
- Lj5g3v0616270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0616270.1 Non Chatacterized Hit- tr|I1NA56|I1NA56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40634
PE,83.76,0,CCAATSUBUNTA,Transcription factor, CBFA/NFYB, DNA
topoisomerase; CBFD_NFYB_HMF,Transcription factor ,CUFF.53542.1
(363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60173 similar to UniRef100_Q1W9Y2 Cluster: Transcript... 680 0.0
gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromoso... 178 2e-44
gnl|LJGI|TC58476 similar to UniRef100_Q67XJ2 Cluster: Nuclear tr... 117 5e-26
gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromoso... 82 3e-15
gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromoso... 68 4e-11
>gnl|LJGI|TC60173 similar to UniRef100_Q1W9Y2 Cluster: Transcription factory NF-YB;
n=1; Salvia miltiorrhiza|Rep: Transcription factory
NF-YB - Salvia miltiorrhiza (Chinese sage), partial
(56%)
Length = 813
Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 1 atggccgatgctccggcgagtcctcccgacgagagcggcgaccacagcccccgctccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggccgatgctccggcgagtcctcccgacgagagcggcgaccacagcccccgctccagc 204
Query: 61 ttccgtgagcaggatcgtttccttcctgttgctaacatcagccgcatcatgaagaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttccgtgagcaggatcgtttccttcctgttgctaacatcagccgcatcatgaagaaggga 264
Query: 121 cttcctgctaatggcaaaatcgctaaggacgccaaggagactgtccaggagtgtgtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttcctgctaatggcaaaatcgctaaggacgccaaggagactgtccaggagtgtgtctct 324
Query: 181 gagttcatcagcttcgtcaccagcgaggcgagtgataaatgccagagagagaagaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagttcatcagcttcgtcaccagcgaggcgagtgataaatgccagagagagaagaggaag 384
Query: 241 actatcaacggcgacgatttgctctgggcaatggccactctgggttttgaagagtacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actatcaacggcgacgatttgctctgggcaatggccactctgggttttgaagagtacatt 444
Query: 301 gatccactcaagctttacctagctgcatacagagagattgagg 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatccactcaagctttacctagctgcatacagagagattgagg 487
>gnl|LJGI|TC69613 homologue to UniRef100_A7NZC8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 985
Score = 178 bits (90), Expect = 2e-44
Identities = 237/286 (82%)
Strand = Plus / Plus
Query: 35 gcggcgaccacagcccccgctccagcttccgtgagcaggatcgtttccttcctgttgcta 94
|||||||||||||||| ||||||| | |||| || || || | | |||||| | || |
Sbjct: 174 gcggcgaccacagccctcgctccaacatccgcgaacaagacaggtaccttccaatcgcca 233
Query: 95 acatcagccgcatcatgaagaagggacttcctgctaatggcaaaatcgctaaggacgcca 154
|||||||||||||||||||||| | || || || |||||||||||||| || ||||| |
Sbjct: 234 acatcagccgcatcatgaagaaagctctccccgccaatggcaaaatcgccaaagacgcaa 293
Query: 155 aggagactgtccaggagtgtgtctctgagttcatcagcttcgtcaccagcgaggcgagtg 214
|||||||||| || ||||| ||||| || |||||||||||| ||||||||||||| ||
Sbjct: 294 aggagactgttcaagagtgcgtctccgaattcatcagcttcatcaccagcgaggcctctg 353
Query: 215 ataaatgccagagagagaagaggaagactatcaacggcgacgatttgctctgggcaatgg 274
|||| || ||| |||||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 354 ataagtgtcagcgagagaagaggaagacgattaacggtgacgatttgctctgggcgatgg 413
Query: 275 ccactctgggttttgaagagtacattgatccactcaagctttacct 320
| || || ||||| || || || |||||||| || ||| |||||||
Sbjct: 414 cgacgctcggtttcgaggattatattgatccccttaagatttacct 459
>gnl|LJGI|TC58476 similar to UniRef100_Q67XJ2 Cluster: Nuclear transcription factor Y
subunit B-10; n=1; Arabidopsis thaliana|Rep: Nuclear
transcription factor Y subunit B-10 - Arabidopsis
thaliana (Mouse-ear cress), partial (70%)
Length = 838
Score = 117 bits (59), Expect = 5e-26
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 97 atcagccgcatcatgaagaagggacttcctgctaatggcaaaatcgctaaggacgccaag 156
|||||||| |||||||||||||| | || |||||||| || || |||||||| || |||
Sbjct: 305 atcagccggatcatgaagaagggtttgccggctaatgggaagattgctaaggatgctaag 364
Query: 157 gagactgtccaggagtgtgtctctgagttcatcagcttcgtcaccagcgaggcgagtgat 216
|| || | ||||| ||||| ||||| ||||||||||| | |||||||||||||||||
Sbjct: 365 gataccatgcaggaatgtgtttctgaattcatcagctttattaccagcgaggcgagtgag 424
Query: 217 aaatgccagagagagaagaggaagactatcaacggcgacgatttgctctgggcaatggc 275
|||||||||| ||||||||| ||||| || || || || |||||||| ||||| |||||
Sbjct: 425 aaatgccagaaagagaagagaaagaccattaatggagatgatttgctgtgggcgatggc 483
>gnl|LJGI|TC76034 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 478
Score = 81.8 bits (41), Expect = 3e-15
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 145 aaggacgccaaggagactgtccaggagtgtgtctctgagttcatcagcttcgtcaccagc 204
|||||||| |||||||| || |||||||| || || |||||||| |||||| ||||| ||
Sbjct: 336 aaggacgcgaaggagacggtgcaggagtgcgtgtcggagttcataagcttcatcaccggc 395
Query: 205 gaggcgagtgataaatgccagagagagaagaggaagactatcaacggcgacgatttgctc 264
|| || || || |||||||| |||||| ||||||| |||||||||||||| |||||
Sbjct: 396 gaagcctccgacaagtgccagagggagaagcggaagacgatcaacggcgacgacttgctg 455
Query: 265 tgggc 269
|||||
Sbjct: 456 tgggc 460
>gnl|LJGI|TC61670 homologue to UniRef100_A7Q978 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 1236
Score = 67.9 bits (34), Expect = 4e-11
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 145 aaggacgccaaggagactgtccaggagtgtgtctctgagttcatcagcttcgtcaccagc 204
|||||||| |||||||| || |||||||| || || |||||||| |||||| ||||| ||
Sbjct: 555 aaggacgcgaaggagacggtgcaggagtgcgtgtcggagttcataagcttcatcaccggc 614
Query: 205 gaggcgagtgataaatgccagagagagaagaggaagactatcaacggcga 254
||||| || || |||||| | |||||| ||||||| |||||||||||
Sbjct: 615 gaggcctccgacaagtgccagcgggagaagcggaagacgatcaacggcga 664