Miyakogusa Predicted Gene
- Lj5g3v0616080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0616080.1 CUFF.53501.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598146 341 5e-93
gnl|LJGI|GO033417 similar to UniRef100_A3DHM8 Cluster: tRNA(Ile)... 272 4e-72
gnl|LJGI|TC70676 weakly similar to UniRef100_Q9KEP5 Cluster: BH0... 172 3e-42
>gnl|LJGI|DC598146
Length = 555
Score = 341 bits (172), Expect = 5e-93
Identities = 233/252 (92%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 299 caacctctaaaaccaccgaaactc-cacacccccaacctgctactccaaaccttatcaat 357
||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 1 caacctctaaaaccaccgaaaggggcacacccccaacctgctacatccaaccttatcaat 60
Query: 358 ccttaccccaacatatcaccgactgcagatccaatttccttaccacaacccctaccaaaa 417
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 61 ccttaccccaacatatcaccgactgcaaatccaatttccttgccacaacccctaccaaaa 120
Query: 418 cctactttaaattcatgtccctctacaagacctatgtacgcaacttcttcggaatctgat 477
|||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||
Sbjct: 121 cctatttcaaattcatgtccatctgcaagacctatgtacgcaacttcttcggaatcagat 180
Query: 478 tctcaaatttcatttgcgccatcctctgttgttggcctggaagatgaggcaaaaacgttg 537
||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||
Sbjct: 181 tctcaaatttcatttgcgccatcctctattgttgacatggaagatgaggcaaaaatgttg 240
Query: 538 atggatgatttg 549
|||||||||||
Sbjct: 241 gtggatgatttg 252
>gnl|LJGI|GO033417 similar to UniRef100_A3DHM8 Cluster: tRNA(Ile)-lysidine synthetase;
n=1; Clostridium thermocellum ATCC 27405|Rep:
tRNA(Ile)-lysidine synthetase - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237), partial (4%)
Length = 645
Score = 272 bits (137), Expect = 4e-72
Identities = 143/145 (98%)
Strand = Plus / Plus
Query: 930 ggatgctagtgtttcaaaacaggagtctccacactcttttccatgtgcttttattagata 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgctagtgtttcaaaacaggagtctccacactcttttccatgtgcttttattagata 60
Query: 990 ttcaacactcactctccttggtttaatttggaagccttttgatcctggtattttgaggca 1049
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 ttcgacactcactctccttggtttaatttggaagccttttgaccctggtattttgaggca 120
Query: 1050 actgaagtcctttatcgtgatgtga 1074
|||||||||||||||||||||||||
Sbjct: 121 actgaagtcctttatcgtgatgtga 145
>gnl|LJGI|TC70676 weakly similar to UniRef100_Q9KEP5 Cluster: BH0807 protein; n=1;
Bacillus halodurans|Rep: BH0807 protein - Bacillus
halodurans, partial (5%)
Length = 580
Score = 172 bits (87), Expect = 3e-42
Identities = 111/119 (93%)
Strand = Plus / Minus
Query: 1 atggaagatcaaccaatgaccaaagcagacctgaaggatgttaccgcggctcttaccgcg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atggaagatcaaccattgaccaaagcagacctgaaggatgttaccgcggctcttaccgcg 255
Query: 61 gccctaactgctattacgcaacatatgacacaacatatgatacaacatatggcgacgtt 119
|||||||||||||| || ||||| |||||| |||| |||| |||||| |||||||||||
Sbjct: 254 gccctaactgctatgacacaacagatgacagaacagatgacacaacagatggcgacgtt 196