Miyakogusa Predicted Gene
- Lj5g3v0615780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0615780.1 Non Chatacterized Hit- tr|B9SGS6|B9SGS6_RICCO
Zinc finger protein, putative OS=Ricinus communis
GN=R,80.73,0,seg,NULL; CCCH zinc finger,NULL; zinc finger,Zinc finger,
CCCH-type; coiled-coil,NULL; SUBFAMILY NOT,CUFF.53485.1
(972 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60111 similar to UniRef100_A7PIB7 Cluster: Chromosome... 1784 0.0
>gnl|LJGI|TC60111 similar to UniRef100_A7PIB7 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1505
Score = 1784 bits (900), Expect = 0.0
Identities = 948/972 (97%)
Strand = Plus / Plus
Query: 1 atgcctcctaaacaatcaaaagctgaggtagcgaagaagcagaaggttgtggaggacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgcctcctaaacaatcaaaagctgaggtagcgaagaagcagaaggttgtggaggacaaa 208
Query: 61 accttcggtctcaagaacaagaacaagagcaaagcggttcagaaatatgtccagaatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 accttcggtctcaagaacaagaacaagagcaaagcggttcagaaatatgtccagaatctc 268
Query: 121 aagtcatccgtgcagcccaaaaccgatcccaaaatcgaagccaagaaaaagaaggaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aagtcatccgtgcagcccaaaaccgatcccaaaatcgaagccaagaaaaagaaggaggag 328
Query: 181 gagaaggccaaggagaaggagctaaatgatttgttcaaaatcgctgttagtcagcctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gagaaggccaaggagaaggagctaaatgatttgttcaaaatcgctgttagtcagcctaaa 388
Query: 241 gtgccagttggtgttgatccgaagtccatattatgtgagttttttaaagtgggacagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtgccagttggtgttgatccgaagtccatattatgtgagttttttaaagtgggacagtgt 448
Query: 301 gccaagggcttcaagtgcaagttctctcatgatttgaatgttcagaggaaaggggaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gccaagggcttcaagtgcaagttctctcatgatttgaatgttcagaggaaaggggaaaag 508
Query: 361 attgacatatacagcgatcagcgtgatgacgaggacactatggaggattgggatcaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 attgacatatacagcgatcagcgtgatgacgaggacactatggaggattgggatcaagcc 568
Query: 421 accttggagaaggtggtggagtcaaagaaaaacgagtttaatcagaacaaacaaactgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 accttggagaaggtggtggagtcaaagaaaaacgagtttaatcagaacaaacaaactgac 628
Query: 481 atagtctgtaaatactttttggatgcggtagagaagaagcaatatggttggttttgggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atagtctgtaaatactttttggatgcggtagagaagaagcaatatggttggttttgggaa 688
Query: 541 tgtcccaatggtggtaagaattgccactatagacatgcactccctcctggatatgtttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tgtcccaatggtggtaagaattgccactatagacatgcactccctcctggatatgtttta 748
Query: 601 aaatctcaaatgaaggctttgttagatgaagaatctgaaaaaatatcaattgaagaggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaatctcaaatgaaggctttgttagatgaagaatctgaaaaaatatcaattgaagaggag 808
Query: 661 attgaaaatcagcgcgccaaagtggccactacaactcctatgactactgagttattcttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 attgaaaatcagcgcgccaaagtggccactacaactcctatgactactgagttattcttt 868
Query: 721 caatggagnnnnnnnnnnnnnnnnnnnnnnnntgctaaattggcttcacaacaggcagag 780
|||||||| ||||||||||||||||||||||||||||
Sbjct: 869 caatggaggaagaagaagacagaagagagagatgctaaattggcttcacaacaggcagag 928
Query: 781 agggctaagaatgaccgaatgagcggtcgtgagctatttttgtcagatgctagcttgttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 agggctaagaatgaccgaatgagcggtcgtgagctatttttgtcagatgctagcttgttt 988
Query: 841 gtggatgatgatgaagcatatgaccagtaccaaagagaacctgaaactgaacagaaagct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gtggatgatgatgaagcatatgaccagtaccaaagagaacctgaaactgaacagaaagct 1048
Query: 901 gctgaagaaggtcctagctcctcggcagcagctggtgctgatgctgaagttcctgatcct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 gctgaagaaggtcctagctcctcggcagcagctggtgctgatgctgaagttcctgatcct 1108
Query: 961 gatgacgatgat 972
||||||||||||
Sbjct: 1109 gatgacgatgat 1120