Miyakogusa Predicted Gene

Lj5g3v0615680.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0615680.2 Non Chatacterized Hit- tr|I1L8Q1|I1L8Q1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.94,0,RUN AND TBC1
DOMAIN CONTAINING 3, PLANT,NULL; TBC1 DOMAIN FAMILY MEMBER
GTPASE-ACTIVATING PROTEIN,NU,CUFF.53476.2
         (2547 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68197 similar to UniRef100_UPI000034F009 Cluster: Rab...    78   3e-13

>gnl|LJGI|TC68197 similar to UniRef100_UPI000034F009 Cluster: RabGAP/TBC
            domain-containing protein; n=1; Arabidopsis thaliana|Rep:
            RabGAP/TBC domain-containing protein - Arabidopsis
            thaliana, partial (23%)
          Length = 592

 Score = 77.8 bits (39), Expect = 3e-13
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1961 tgaaggttgaattatgcagattgctggaggataaacgatctgctatactcagagctgagg 2020
            ||||||||||| | || ||||| |||||||| ||| |||| ||||| || ||||| ||||
Sbjct: 305  tgaaggttgaactttgtagattactggaggagaaaagatcagctattcttagagcagagg 364

                                                                        
Query: 2021 agctagaaacagctttaatggagatggtgaaggaagataatcgtctgcaattgagtgcaa 2080
            |||| |||||||| || ||||||||||| ||| | |||||| | | |||| ||||||| |
Sbjct: 365  agcttgaaacagcattgatggagatggtcaagcaggataataggcggcaactgagtgcca 424

                       
Query: 2081 gggttgagcaa 2091
             ||| ||||||
Sbjct: 425  aggtagagcaa 435