Miyakogusa Predicted Gene
- Lj5g3v0615420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0615420.1 tr|I0YSF8|I0YSF8_9CHLO Alternative oxidase
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,30.83,0.00001,seg,NULL,CUFF.53439.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66063 weakly similar to UniRef100_Q10N48 Cluster: Exp... 1386 0.0
gnl|LJGI|AW719990 weakly similar to UniRef100_Q10N48 Cluster: Ex... 593 e-169
gnl|LJGI|TC70837 similar to UniRef100_Q10N48 Cluster: Expressed ... 94 2e-18
>gnl|LJGI|TC66063 weakly similar to UniRef100_Q10N48 Cluster: Expressed protein; n=1;
Oryza sativa Japonica Group|Rep: Expressed protein -
Oryza sativa subsp. japonica (Rice), partial (53%)
Length = 771
Score = 1386 bits (699), Expect = 0.0
Identities = 699/699 (100%)
Strand = Plus / Plus
Query: 106 gtcaaagtcgtcgtttcgaagtggtgctccattcccatgatgtcgcttcccaattccaga 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtcaaagtcgtcgtttcgaagtggtgctccattcccatgatgtcgcttcccaattccaga 61
Query: 166 gtttccgtcgccattttcctctctttcatattcttcacctccttcccagggttgatgtta 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtttccgtcgccattttcctctctttcatattcttcacctccttcccagggttgatgtta 121
Query: 226 tgtgcagttgtgtcgctaaattcaattgaggtcttcagaacacacgaatggttgaaagct 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtgcagttgtgtcgctaaattcaattgaggtcttcagaacacacgaatggttgaaagct 181
Query: 286 acttcaactgtgtatttcctctgcacagaggagaacaagacggtgcttccagatgtcaaa 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acttcaactgtgtatttcctctgcacagaggagaacaagacggtgcttccagatgtcaaa 241
Query: 346 agaccccatgtcttttactctttcaatgggaatgaatcttggcagcctctaagcagcttt 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agaccccatgtcttttactctttcaatgggaatgaatcttggcagcctctaagcagcttt 301
Query: 406 tccagtaaaaagtgcaagcggtgtggactctatgaggaagacagcattacttcagatgat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tccagtaaaaagtgcaagcggtgtggactctatgaggaagacagcattacttcagatgat 361
Query: 466 gtatttgaagaatgggagttttgtccttctgattttactggacctgatggtgaatataac 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtatttgaagaatgggagttttgtccttctgattttactggacctgatggtgaatataac 421
Query: 526 aggttcaaggaaaaggaattcaatgccacttttctgtgccaagagtgcttatcgcttgct 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggttcaaggaaaaggaattcaatgccacttttctgtgccaagagtgcttatcgcttgct 481
Query: 586 ggtgtttctagctcttctgatggaaaaggaatgcatatagcagttgcggttttgcttagt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggtgtttctagctcttctgatggaaaaggaatgcatatagcagttgcggttttgcttagt 541
Query: 646 gttttggcctcaattatagtgattcttggagtgatgggtgcatataaattctggctaaag 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gttttggcctcaattatagtgattcttggagtgatgggtgcatataaattctggctaaag 601
Query: 706 aagataagggaacaagaccagactcggcttttgaagttatttgaagatggagattacatg 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aagataagggaacaagaccagactcggcttttgaagttatttgaagatggagattacatg 661
Query: 766 gaagatgagctgggccttggtagtgccataatgctataa 804
|||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaagatgagctgggccttggtagtgccataatgctataa 700
>gnl|LJGI|AW719990 weakly similar to UniRef100_Q10N48 Cluster: Expressed protein; n=1;
Oryza sativa Japonica Group|Rep: Expressed protein -
Oryza sativa subsp. japonica (Rice), partial (11%)
Length = 430
Score = 593 bits (299), Expect = e-169
Identities = 313/318 (98%)
Strand = Plus / Plus
Query: 1 atgtgcacgttgagtagaccagactctttcttccgccaaccaatcacgcgactcgtccag 60
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 113 atgtgcacgttgagtagaccnttttttttcttccgccaaccaatcacgcgactcgtccag 172
Query: 61 tctccgctctcccctattcaaaaccaaacttctcatccttttctcgtcaaagtcgtcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tctccgctctcccctattcaaaaccaaacttctcatccttttctcgtcaaagtcgtcgtt 232
Query: 121 tcgaagtggtgctccattcccatgatgtcgcttcccaattccagagtttccgtcgccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcgaagtggtgctccattcccatgatgtcgcttcccaattccagagtttccgtcgccatt 292
Query: 181 ttcctctctttcatattcttcacctccttcccagggttgatgttatgtgcagttgtgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttcctctctttcatattcttcacctccttcccagggttgatgttatgtgcagttgtgtcg 352
Query: 241 ctaaattcaattgaggtcttcagaacacacgaatggttgaaagctacttcaactgtgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctaaattcaattgaggtcttcagaacacacgaatggttgaaagctacttcaactgtgtat 412
Query: 301 ttcctctgcacagaggag 318
||||||||||||||||||
Sbjct: 413 ttcctctgcacagaggag 430
>gnl|LJGI|TC70837 similar to UniRef100_Q10N48 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (62%)
Length = 975
Score = 93.7 bits (47), Expect = 2e-18
Identities = 149/183 (81%)
Strand = Plus / Plus
Query: 409 agtaaaaagtgcaagcggtgtggactctatgaggaagacagcattacttcagatgatgta 468
||||||||||||||||| |||||| | |||||| ||||| |||| ||||||||||||
Sbjct: 427 agtaaaaagtgcaagcgatgtggattgtatgagaaagaccccattctttcagatgatgtg 486
Query: 469 tttgaagaatgggagttttgtccttctgattttactggacctgatggtgaatataacagg 528
||||| || |||||| | ||||||||||||||| | | |||||||| |||| | |
Sbjct: 487 tttgatgagtgggagctgtgtccttctgattttgccgcccctgatggaaaatacagcctc 546
Query: 529 ttcaaggaaaaggaattcaatgccacttttctgtgccaagagtgcttatcgcttgctggt 588
|||||||| || ||||| ||||| ||||| || |||| |||||||||| | ||| |||||
Sbjct: 547 ttcaaggagaaagaatttaatgctactttcctctgcccagagtgcttaactcttcctggt 606
Query: 589 gtt 591
|||
Sbjct: 607 gtt 609
Score = 71.9 bits (36), Expect = 6e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 677 tgatgggtgcatataaattctggctaaagaagataagggaacaagaccagactcggcttt 736
|||||||||||||||| | ||||| |||||||| || || ||||| || ||||| |||
Sbjct: 710 tgatgggtgcatataagtactggcaaaagaagaagagagagcaagatcaagctcggtttt 769
Query: 737 tgaagttatttgaagatggagattacatggaagatgagct 776
|||||||||||||||| |||||| || | || ||||||||
Sbjct: 770 tgaagttatttgaagaaggagatgaccttgaggatgagct 809