Miyakogusa Predicted Gene

Lj5g3v0615090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0615090.1 Non Chatacterized Hit- tr|I1LYX1|I1LYX1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24949
PE,84.19,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
Pectin lyase-like,Pectin lyase fold/virul,CUFF.53522.1
         (1143 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75637 similar to UniRef100_A7Q434 Cluster: Chromosome...   192   3e-48

>gnl|LJGI|TC75637 similar to UniRef100_A7Q434 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (97%)
          Length = 1339

 Score =  192 bits (97), Expect = 3e-48
 Identities = 286/349 (81%)
 Strand = Plus / Plus

                                                                       
Query: 498 tgatgttgatggcattcagataaagcctaattcacagcacatatggatagaccgttgcag 557
           |||||| ||||||||||| || || ||||||||   |||||||||||| || || |||||
Sbjct: 411 tgatgtggatggcattcaaatcaaacctaattctaggcacatatggattgatcgatgcag 470

                                                                       
Query: 558 tctcagtgattttgatgatgggctcatagatattacaagagaaagcacagatataactat 617
            ||  |||||| |||||||||||| ||||| ||||||||| | ||||||||||| |||||
Sbjct: 471 ccttcgtgattatgatgatgggcttatagacattacaagacagagcacagatatcactat 530

                                                                       
Query: 618 ttcaaggtgtcatttctcgcggcatgacaaaacaatactcataggggcagatccctctca 677
            || || ||||| ||  |    |||||||| || || || || || || ||||| |||||
Sbjct: 531 atctagatgtcactttgcatcacatgacaagaccatgctaattggagctgatccatctca 590

                                                                       
Query: 678 tgttggtgacagatgcatgagggtcaccattcaccattgtttctttaatgggactcgaca 737
            ||||| ||  |||||||  |||| |||||||| |||||||||||| | || || || ||
Sbjct: 591 cgttggcgatcgatgcatccgggtgaccattcatcattgtttctttgacggaacccggca 650

                                                                       
Query: 738 gagacaccctcgtgttagatatgctaaagtacatctgtacaataattacaccagagactg 797
            |||||||||||||| |||| ||  ||||| ||||||||||| |||||||||||| ||||
Sbjct: 651 aagacaccctcgtgtgagatttggaaaagttcatctgtacaacaattacaccagaaactg 710

                                                            
Query: 798 gggcatatatgctgtttgtgccagtgtggaatcccagatattctctcaa 846
           ||| ||||||||||||||||| ||||| || |||||||||| |||||||
Sbjct: 711 gggaatatatgctgtttgtgctagtgttgagtcccagatatactctcaa 759