Miyakogusa Predicted Gene

Lj5g3v0589900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0589900.1 tr|G7I5R4|G7I5R4_MEDTR Myosin-like protein
OS=Medicago truncatula GN=MTR_1g009610 PE=4
SV=1,71.24,0,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; Spectrin repeat,NULL,CUFF.53325.1
         (7515 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071448                                                      78   9e-13
gnl|LJGI|TC81425 similar to UniRef100_A7QJR7 Cluster: Chromosome...    76   4e-12

>gnl|LJGI|BP071448 
          Length = 379

 Score = 77.8 bits (39), Expect = 9e-13
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 6495 agaaattgaagcactgatgcatgcacttgatgaggaagagatgcaaatggaagaactgac 6554
            |||||||||||| ||  |||||| ||||||||||||||||||||||||||| ||| |  |
Sbjct: 334  agaaattgaagctctattgcatgaacttgatgaggaagagatgcaaatggatgaattagc 275

                                   
Query: 6555 aaagaagattgtagaagttgaaa 6577
            ||||| || | ||||||||||||
Sbjct: 274  aaagaggactatagaagttgaaa 252


>gnl|LJGI|TC81425 similar to UniRef100_A7QJR7 Cluster: Chromosome undetermined
            scaffold_107, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_107, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (4%)
          Length = 598

 Score = 75.8 bits (38), Expect = 4e-12
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                        
Query: 6496 gaaattgaagcactgatgcatgcacttgatgaggaagagatgcaaatggaagaactgaca 6555
            |||||||||||  | ||||||| ||||||||||||||||||||||||||| ||| |  ||
Sbjct: 67   gaaattgaagctttaatgcatgaacttgatgaggaagagatgcaaatggatgaattagca 126

                                  
Query: 6556 aagaagattgtagaagttgaaa 6577
            |||| || | ||||||||||||
Sbjct: 127  aagaggactatagaagttgaaa 148