Miyakogusa Predicted Gene

Lj5g3v0554400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0554400.1 tr|B9H7G8|B9H7G8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_559256 PE=4
SV=1,63.64,7e-18,DUF1997,Protein of unknown function
DUF1997,CUFF.53391.1
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO023500                                                     702   0.0  

>gnl|LJGI|GO023500 
          Length = 735

 Score =  702 bits (354), Expect = 0.0
 Identities = 354/354 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaaagctatccttttgagtaacaagtggtacagccatggacaacgctcctccacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggcaaaagctatccttttgagtaacaagtggtacagccatggacaacgctcctccacc 205

                                                                       
Query: 61  ctgcaaaaattcagccacgggaagaaaatagacatcaaggcagtgacttcgtcggactct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctgcaaaaattcagccacgggaagaaaatagacatcaaggcagtgacttcgtcggactct 265

                                                                       
Query: 121 aattcgaagaaagcaaatttatttgctgcaaaaaaggatagagttaaactgccaacatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aattcgaagaaagcaaatttatttgctgcaaaaaaggatagagttaaactgccaacatat 325

                                                                       
Query: 181 gatgatgttcttgggggcaagagataccccatcagtgaatttctaagccaacctagtgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gatgatgttcttgggggcaagagataccccatcagtgaatttctaagccaacctagtgca 385

                                                                       
Query: 241 attgcttcagtactgaacacgaaggccttgcagtcatttcaatctcttggtgctaacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attgcttcagtactgaacacgaaggccttgcagtcatttcaatctcttggtgctaacaca 445

                                                                 
Query: 301 tacaggtgtgaactgcctaaacttcgatttttcaactttgaagcttcccctatc 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tacaggtgtgaactgcctaaacttcgatttttcaactttgaagcttcccctatc 499