Miyakogusa Predicted Gene
- Lj5g3v0554360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0554360.1 CUFF.53384.1
(1167 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 244 1e-63
gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 145 7e-34
gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 88 1e-16
gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosom... 72 9e-12
gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chr... 72 9e-12
>gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1330
Score = 244 bits (123), Expect = 1e-63
Identities = 421/519 (81%), Gaps = 21/519 (4%)
Strand = Plus / Plus
Query: 1 atggtgatgaagggaattactcacggcgcttgtcattatatgctgaaacctgttagagtt 60
|||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 211 atggtgttgaagggaattactcatggcgcttgtgattatctgctgaaacctgttagagtt 270
Query: 61 gaggagctaaagaccatttggcagcatgtaatcaggaacaagaaaat---tgcctcgaag 117
||||||||| || ||||||||||||||| ||||||| ||||| | || | |||||
Sbjct: 271 gaggagctacggaacatttggcagcatgtggtcaggaagaagaagaagactgtcccgaag 330
Query: 118 gaaaaggaagggaccaaaaccagcagcaaccatgagacacttaatt---atagcgacaat 174
||| |||||||||||| ||| |||| || || | || || |||| |||||
Sbjct: 331 gaa------gggaccaaaaccggca---accaagacactcctatttctcatagtgacaac 381
Query: 175 ggtcaagggtccgcagccacaccaaattcagatcaaaatggaaagtcatccaagaaaaga 234
||||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 382 ggtcaagggtcggcagcgacaacaaattccgatcaaaatggaaaatcatccaagaaaagg 441
Query: 235 aagtatc------aagatttcgatgacgaggagcatgagaatggtactgatagtggggac 288
||| | | ||||| ||| | |||| ||||||||||||| || |||| |||
Sbjct: 442 aaggacctggaggaagatgatgataatgaggtgcatgagaatggtgacgacagtgatgac 501
Query: 289 tcatcagctcagaagaagcctcgagttgtctggtctggggagctacaccaaaaatttctc 348
|||||||||||| ||||||||||||||| ||||| | || || |||| || ||| |
Sbjct: 502 ccatcagctcagaggaagcctcgagttgtttggtcggttgacctgcaccgcaagtttgtt 561
Query: 349 gctgttgtcaatcagttaggcattgacaaggctgtccctaaaaaagttcttaaattgatg 408
|||| ||||||||||||||| | || |||||||| ||||||| | ||||| || |||||
Sbjct: 562 gctgccgtcaatcagttaggcctggataaggctgtacctaaaagaattcttgaaatgatg 621
Query: 409 gatgttgaaaaccttacaagggagaatgtggccagccatctgcagaaatatagactttat 468
||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 622 aatgttgatcagcttacaagggagaatgttgccagccatcttcagaaatatagactttat 681
Query: 469 ctgaaaagaattagctctatggcgaaccaacaagctaat 507
||||| ||| |||||| | ||| |||||||||||||||
Sbjct: 682 ctgaagagacttagctgtgtggaaaaccaacaagctaat 720
Score = 60.0 bits (30), Expect = 3e-08
Identities = 59/68 (86%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 732 gggaagagtttcaacttcattagcccctcaaga---ttcacaattctctctccctctgct 788
|||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| || |
Sbjct: 1215 gggaggagtttctacttcattagccccacaacaacattcacaattctctctccctttgat 1274
Query: 789 ggataatg 796
||||||||
Sbjct: 1275 ggataatg 1282
Score = 52.0 bits (26), Expect = 8e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 594 tgatcaatttgaatacagcaagggtgttagtcatattccaaaccagaaca 643
||||||||| || ||| |||||||||||||||||||| ||||| |||||
Sbjct: 1056 tgatcaattgcaacacaacaagggtgttagtcatattcaaaacctgaaca 1105
>gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 893
Score = 145 bits (73), Expect = 7e-34
Identities = 139/161 (86%)
Strand = Plus / Plus
Query: 300 gaagaagcctcgagttgtctggtctggggagctacaccaaaaatttctcgctgttgtcaa 359
|||||||||||| ||||| ||||||| |||||| ||| || || | |||| ||| ||
Sbjct: 733 gaagaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgttaa 792
Query: 360 tcagttaggcattgacaaggctgtccctaaaaaagttcttaaattgatggatgttgaaaa 419
|||| ||||||||||||||||||| |||||||| |||||| | |||||| ||||||||||
Sbjct: 793 tcagctaggcattgacaaggctgtgcctaaaaaggttcttgatttgatgaatgttgaaaa 852
Query: 420 ccttacaagggagaatgtggccagccatctgcagaaatata 460
||||||||||||||||||||||||||| | ||||||||||
Sbjct: 853 gcttacaagggagaatgtggccagccatttacagaaatata 893
Score = 87.7 bits (44), Expect = 1e-16
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 2 tggtgatgaagggaattactcacggcgcttgtcattatatgctgaaacctgttagagttg 61
||||||||||||| ||| ||||||| || || ||||| ||||||| ||||| ||| | |
Sbjct: 483 tggtgatgaaggggatttctcacggggcctgcgattatctgctgaagcctgtgagaatgg 542
Query: 62 aggagctaaagaccatttggcagcatgtaatcagga 97
|||||||||||| ||||||||||||||| |||||||
Sbjct: 543 aggagctaaagaacatttggcagcatgtgatcagga 578
>gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 819
Score = 87.7 bits (44), Expect = 1e-16
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 2 tggtgatgaagggaattactcacggcgcttgtcattatatgctgaaacctgttagagttg 61
||||||||||||| ||| ||||||| || || ||||| ||||||| ||||| ||| | |
Sbjct: 457 tggtgatgaaggggatttctcacggggcctgcgattatctgctgaagcctgtgagaatgg 516
Query: 62 aggagctaaagaccatttggcagcatgtaatcagga 97
|||||||||||| ||||||||||||||| |||||||
Sbjct: 517 aggagctaaagaacatttggcagcatgtgatcagga 552
Score = 73.8 bits (37), Expect = 2e-12
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 300 gaagaagcctcgagttgtctggtctggggagctacaccaaaaatttctcgctgttgtcaa 359
|||||||||||| ||||| ||||||| |||||| ||| || || | |||| ||| ||
Sbjct: 707 gaagaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgttaa 766
Query: 360 tcagttaggcattgacaaggctgtccctaaaaaagttcttaaattgatg 408
|||| ||||||||||||||||||| |||||||| |||||| | ||||||
Sbjct: 767 tcagctaggcattgacaaggctgtgcctaaaaaggttcttgatttgatg 815
>gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 672
Score = 71.9 bits (36), Expect = 9e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 2 tggtgatgaagggaattactcacggcgcttgtcattatatgctgaaacctgttagagttg 61
||||||||||||| ||| ||||||| || || ||||| ||||| | ||||| ||| | |
Sbjct: 583 tggtgatgaaggggatttctcacggggcctgcgattatctgctggagcctgtgagaatgg 642
Query: 62 aggagctaaagaccatttggcagcatgt 89
|||||||||||| |||||||||||||||
Sbjct: 643 aggagctaaagaacatttggcagcatgt 670
>gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 694
Score = 71.9 bits (36), Expect = 9e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 951 ttaccattctcatgttagtggtaactcactaggctctacgattcctgcgaatggtg 1006
|||| |||||||||||| |||||||||| |||||||||||||||| |||||||||
Sbjct: 62 ttacaattctcatgttattggtaactcaataggctctacgattcccccgaatggtg 117
Score = 65.9 bits (33), Expect = 5e-10
Identities = 95/115 (82%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 1015 aactcagcgttcaatttttgcgatcccttgcaaatggaccatgatgagatcattgaatta 1074
|||||| | ||||||||| | |||||||| |||||| | ||||||| |||||||||||||
Sbjct: 144 aactcaaccttcaattttggtgatcccttacaaatgaagcatgatgggatcattgaatta 203
Query: 1075 gctgaagagtgctcaattaaaccacatcagc---tacatgtaatagaccagcaga 1126
||| |||| |||| | | ||||||||||| |||||||||| |||||||||
Sbjct: 204 cctggagagccctcattgataccacatcagcaggtacatgtaatgaaccagcaga 258