Miyakogusa Predicted Gene
- Lj5g3v0554340.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0554340.2 CUFF.53381.2
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77987 similar to UniRef100_A7QQ43 Cluster: Chromosome... 1092 0.0
gnl|LJGI|TC79253 similar to UniRef100_A7QQ43 Cluster: Chromosome... 349 1e-95
>gnl|LJGI|TC77987 similar to UniRef100_A7QQ43 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 792
Score = 1092 bits (551), Expect = 0.0
Identities = 587/594 (98%), Gaps = 5/594 (0%)
Strand = Plus / Plus
Query: 1 atgggtgaagagaaggaaactagtgctgctgctgctactaatactgatactacgaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgggtgaagagaaggaaactagtgctgctgctgctactaatactgatactacgaagaag 234
Query: 61 aagcagaggaagggtttgatttcacgaatttggaacgtgatttttaggtccaatggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagcagaggaagggtttgatttcacgaatttggaacgtgatttttaggtccaatggaaat 294
Query: 121 gatttggagaagaggctacagcatttatccaaagcagaagcttctgttatgaataaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatttggagaagaggctacagcatttatccaaagcagaagcttctgttatgaataaaatc 354
Query: 181 gccaacaggtcccgcttccgtagccgaatcttgcgcaaccttattctgttttctgttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gccaacaggtcccgcttccgtagccgaatcttgcgcaaccttattctgttttctgttcta 414
Query: 241 tttcaggtcattgctgtagtttatgctactatgacaacaagatccgtgggtatgaattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttcaggtcattgctgtagtttatgctactatgacaacaagatccgtgggtatgaattgg 474
Query: 301 aaaatgagggcaatccgagttttgccaatgtttcttttgcctgccttatcatctgctgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aaaatgagggcaatccgagttttgccaatgtttcttttgcctgccttatcatctgctgcg 534
Query: 361 tattccttctttgtcagcttcatacggatgtgtgatcgcagggaccaaaaaactcttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tattccttctttgtcagcttcatacggatgtgtgatcgcagggaccaaaaaactcttgaa 594
Query: 421 acactgagagctgaaaggcaggcaaaaattgacgagctcaaagagaagacaaattattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acactgagagctgaaaggcaggcaaaaattgacgagctcaaagagaagacaaattattac 654
Query: 481 attactcaacaactcattcagagatatgacacagacccagcagcaaaggcagctgctgct 540
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 655 attactcaacaactcattcagagatatgacacggacccagcagcaaa-gcagctgctgct 713
Query: 541 actgttttggcatctaagttgggtgcggattcgggcttgaaagtgcatgtgaga 594
|||| ||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 714 actg-tttggcatctaagttgggtgcggat--cggcttg-aagtgcatgtgaga 763
>gnl|LJGI|TC79253 similar to UniRef100_A7QQ43 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1107
Score = 349 bits (176), Expect = 1e-95
Identities = 290/328 (88%)
Strand = Plus / Plus
Query: 261 ttatgctactatgacaacaagatccgtgggtatgaattggaaaatgagggcaatccgagt 320
|||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 2 ttatgctattatgacaacaagatcagtggatatgaattggaaaatgagggcaatccgggt 61
Query: 321 tttgccaatgtttcttttgcctgccttatcatctgctgcgtattccttctttgtcagctt 380
|||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 62 tttgcctatgtttcttttgcctgcactatcatctgctgcgtattcaggatttgtcagctt 121
Query: 381 catacggatgtgtgatcgcagggaccaaaaaactcttgaaacactgagagctgaaaggca 440
|| || ||||||||||||||||| |||| |||||| | || |||||||||||||
Sbjct: 122 caccaaaatttgtgatcgcagggaccagaaaattcttgataggcttcgagctgaaaggca 181
Query: 441 ggcaaaaattgacgagctcaaagagaagacaaattattacattactcaacaactcattca 500
||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||||||
Sbjct: 182 agcaaaaattgatgagctcaaagaaaagacaaattattactctacacaacagctcattca 241
Query: 501 gagatatgacacagacccagcagcaaaggcagctgctgctactgttttggcatctaagtt 560
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 242 gagatatgacactgacccagctgcaaaggcagctgctgcaactgttttggcatataagtt 301
Query: 561 gggtgcggattcgggcttgaaagtgcat 588
|||||| ||||| || ||||||||||||
Sbjct: 302 gggtgcagattctggtttgaaagtgcat 329