Miyakogusa Predicted Gene
- Lj5g3v0553260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0553260.1 CUFF.53330.1
(4521 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosom... 1063 0.0
gnl|LJGI|GO023968 similar to UniRef100_A7P540 Cluster: Chromosom... 438 e-121
gnl|LJGI|BW595912 similar to UniRef100_A7P540 Cluster: Chromosom... 268 3e-70
gnl|LJGI|DN652295 homologue to UniRef100_A7P540 Cluster: Chromos... 167 8e-40
gnl|LJGI|BP054670 107 6e-22
>gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 556
Score = 1063 bits (536), Expect = 0.0
Identities = 551/556 (99%)
Strand = Plus / Minus
Query: 1973 tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 2032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 497
Query: 2033 gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 437
Query: 2093 aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 2152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 377
Query: 2153 agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 317
Query: 2213 ccaactcagggcatgcaagtacattggctgctacagatgcagctacccctaccttaagcc 2272
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 316 ccaactcagggcatgcaagtacattggctgctacagatgcagctactcctaccttaaggc 257
Query: 2273 tcatagaaagagaagctatagctcctgccactcctatatcatacgattcgagggaacttt 2332
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcatagaaagagaagctatagctgctgccactcctatatcatacgattcgagggaacttt 197
Query: 2333 tacaacttattcatgaatacgtacgagcatctggattgtcacaaactgcttctatattgc 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tacaacttattcatgaatacgtacgagcatctggattgtcacaaactgcttctatattgc 137
Query: 2393 ttaaagaggctcagttgaaacctttgccatcattgattgctccatcttctcttgcacagc 2452
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 136 ttaaagaggctcagttgaaacctttgccatcatcgattgctccatcttctcttgcacagc 77
Query: 2453 caccctcaacacaggaagctccttcagtacagcttcaatggccttcaggtcgtgctcctg 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 caccctcaacacaggaagctccttcagtacagcttcaatggccttcaggtcgtgctcctg 17
Query: 2513 ggtttctgtcggacaa 2528
||||||||||||||||
Sbjct: 16 ggtttctgtcggacaa 1
>gnl|LJGI|GO023968 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 667
Score = 438 bits (221), Expect = e-121
Identities = 374/425 (88%)
Strand = Plus / Plus
Query: 3865 tctgagcctgttcatcgctttgatcagttcactgactatggtggtggaggctttcatcct 3924
|||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 26 tctgggcctgttcatcgctttgatcagttcacagactatgggggtggaggctttcatcct 85
Query: 3925 gctggcaatgaggttattataaactcagaagtctgggacctacgcaagttcagtctgctt 3984
||||||||||||||| |||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 86 gctggcaatgaggttgttataaactctgaagtctgggatctgcgcaagttcagacttcta 145
Query: 3985 cgtagtgtaccatcattagatcaaacagaaataacattcaatgcgcatggtgatgtgtta 4044
|| || || || |||||||||||||||| ||||||||||||||| | |||||||| |
Sbjct: 146 cgcagcgtgccttcattagatcaaacagcaataacattcaatgcacgcggtgatgtaatg 205
Query: 4045 tatgcaatcctgaggagaaaaatcgaggatgttatgtcagcagtcaacacacgtcgtgtc 4104
||||||||| |||||||||| | |||||||| |||||||||||| || |||||||||||
Sbjct: 206 tatgcaatcttgaggagaaatcttgaggatgtaatgtcagcagtccacgcacgtcgtgtc 265
Query: 4105 aagcatcctctttttgcagctttccgcacagtggacgcagtgaattattcagaaattgct 4164
||||||||||||||||||||||||||||||||||| ||| | |||||||| || ||||||
Sbjct: 266 aagcatcctctttttgcagctttccgcacagtggatgcaatcaattattcggacattgct 325
Query: 4165 actatcccagtggaccgctgtgttcttgatttcgcaaccgagcccacagattcaattgtt 4224
|||| ||| || || ||||||||||||||||||||||| || || ||||||||| |||||
Sbjct: 326 actacccctgttgatcgctgtgttcttgatttcgcaactgaaccaacagattcatttgtt 385
Query: 4225 gggttggttacaatggatgatcaagatgaaatgtttgcctcagccagaatctatgaaatt 4284
||| || | || |||||||||||| |||| |||| ||| ||||||||| | |||||||||
Sbjct: 386 gggctgataactatggatgatcaaaatgagatgtatgcatcagccagagtatatgaaatt 445
Query: 4285 ggtcg 4289
|||||
Sbjct: 446 ggtcg 450
>gnl|LJGI|BW595912 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 486
Score = 268 bits (135), Expect = 3e-70
Identities = 321/383 (83%)
Strand = Plus / Plus
Query: 3917 ttcatcctgctggcaatgaggttattataaactcagaagtctgggacctacgcaagttca 3976
|||||||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
Sbjct: 12 ttcatcctgctggcaatgaggttattatcaactttgaagtctgggatctgcgcaagttta 71
Query: 3977 gtctgcttcgtagtgtaccatcattagatcaaacagaaataacattcaatgcgcatggtg 4036
| || || | | || || || |||||||||||| ||||||||||||||| | |||||
Sbjct: 72 gacttctacacatcgtgccttccttagatcaaacatcaataacattcaatgctcgtggtg 131
Query: 4037 atgtgttatatgcaatcctgaggagaaaaatcgaggatgttatgtcagcagtcaacacac 4096
|||| ||||||||||| | |||||||| | |||||||| | |||||||||| ||||||
Sbjct: 132 atgtaatatatgcaatcttaaggagaaatcttgaggatgtaacgtcagcagtccacacac 191
Query: 4097 gtcgtgtcaagcatcctctttttgcagctttccgcacagtggacgcagtgaattattcag 4156
| ||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 192 gccgtgtcaagcatcctctatttgcagctttccgcacagtggatgcaatcaattattctg 251
Query: 4157 aaattgctactatcccagtggaccgctgtgttcttgatttcgcaaccgagcccacagatt 4216
| |||||||||| || || || || |||||||||||||| ||||| ||||| |||||||
Sbjct: 252 acattgctactacccttgttgatcgttgtgttcttgattttgcaactgagccaacagatt 311
Query: 4217 caattgttgggttggttacaatggatgatcaagatgaaatgtttgcctcagccagaatct 4276
|| ||| |||| || | || |||||||||||| ||| |||| ||| |||||||| | |
Sbjct: 312 catttgctgggctgataactttggatgatcaaggtgagatgtatgcatcagccagggtat 371
Query: 4277 atgaaattggtcgtaggaggcca 4299
||||||||||||| ||||||||
Sbjct: 372 atgaaattggtcgacggaggcca 394
>gnl|LJGI|DN652295 homologue to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (3%)
Length = 188
Score = 167 bits (84), Expect = 8e-40
Identities = 147/168 (87%)
Strand = Plus / Minus
Query: 3099 caactcagagcgtatgacattagattctatagttgttcaatatctgaagcatcagcatct 3158
|||||| |||||| | ||||| |||||| |||| ||||| |||||||||||||||||||
Sbjct: 186 caactctgagcgtgtaacattggattctctagtggttcagtatctgaagcatcagcatcg 127
Query: 3159 ccaatgcccagctcctattaccactcttcctccactatctctattacatcctcatgtttg 3218
||||||||| ||||| |||||||| ||||||||||| ||||| |||| || ||||||||
Sbjct: 126 ccaatgccccgctcccattaccacacttcctccactgtctcttctacacccacatgtttg 67
Query: 3219 tcctgaacccaagcgaagccttgatgctgcttctaatgtgacagctcg 3266
||| ||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct: 66 tccggaacctaagcgaagccttgatgccccttctaatgtgtcagctcg 19
>gnl|LJGI|BP054670
Length = 367
Score = 107 bits (54), Expect = 6e-22
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 4457 gagatttcatcatggacttccaaggaggaactgacatattggacatggtatcagaagg 4514
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 215 gagatttcatcatggacttcccaggaggaactgacatattggacatggtatcagaagg 158
Score = 54.0 bits (27), Expect = 8e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4372 cctcttttaggccctggatttggagac 4398
|||||||||||||||||||||||||||
Sbjct: 300 cctcttttaggccctggatttggagac 274