Miyakogusa Predicted Gene
- Lj5g3v0550190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0550190.1 tr|G7I6A8|G7I6A8_MEDTR Serine/threonine protein
phosphatase 2A 57 kDa regulatory subunit B' iota
iso,86.34,0,B56,Protein phosphatase 2A, regulatory B subunit, B56; ARM
repeat,Armadillo-type fold; SERINE/THREON,CUFF.53285.1
(1515 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68586 similar to UniRef100_A7P5G8 Cluster: Chromosome... 1328 0.0
gnl|LJGI|TC67827 432 e-120
gnl|LJGI|TC69266 similar to UniRef100_A7P5G8 Cluster: Chromosome... 252 6e-66
gnl|LJGI|BW614928 similar to UniRef100_A7PEW0 Cluster: Chromosom... 168 6e-41
gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome... 84 3e-15
>gnl|LJGI|TC68586 similar to UniRef100_A7P5G8 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (46%)
Length = 916
Score = 1328 bits (670), Expect = 0.0
Identities = 673/674 (99%)
Strand = Plus / Plus
Query: 842 ttagtgggtttgctttacccttgaaagaggagcacaaaatcttcttgtggagagttttga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagtgggtttgctttacccttgaaagaggagcacaaaatcttcttgtggagagttttga 60
Query: 902 tccccttgcacaagcctaaatctatgggggtctactttcagcaattgtccttctgtgtta 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccccttgcacaagcctaaatctatgggggtctactttcagcaattgtccttctgtgtta 120
Query: 962 cgcagtttatagaaaaggagccaaagttagcaagcgttgtgataagtggtttgttaaaat 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcagtttatagaaaaggagccaaagttagcaagcgttgtgataagtggtttgttaaaat 180
Query: 1022 attggccagtaacaaatagccagaaagaggtgatgtttctgggtgaactggaagaaattt 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggccagtaacaaatagccagaaagaggtgatgtttctgggtgaactggaagaaattt 240
Query: 1082 tagaatcaattaacatggtagagttccagaggatcatggtccagttgttttggcggattg 1141
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 tagaatcaattaacatggtagagttccggaggatcatggtccagttgttttggcggattg 300
Query: 1142 ggtgctgcattaacagcttgcactttcaggtagctgaaagggcccttttcttatggaaca 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgctgcattaacagcttgcactttcaggtagctgaaagggcccttttcttatggaaca 360
Query: 1202 acgaccacattgtcaacttgattgcgcataaccgtcaagttatcctgcccatcatatttc 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acgaccacattgtcaacttgattgcgcataaccgtcaagttatcctgcccatcatatttc 420
Query: 1262 cagctctagataggaatattcaaagccactggaacccagcagttgtcaacttaactcata 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagctctagataggaatattcaaagccactggaacccagcagttgtcaacttaactcata 480
Query: 1322 atattagaaaaatgttcttggagatggatgagaagctcttcatttcttgccattctaact 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattagaaaaatgttcttggagatggatgagaagctcttcatttcttgccattctaact 540
Query: 1382 acaaggaggaagaagtgcttttaagctcagcagccgagaagcgaaaggaggcatggaaac 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaggaggaagaagtgcttttaagctcagcagccgagaagcgaaaggaggcatggaaac 600
Query: 1442 ttcttgagcatgctgcaagtctcaagcctgtaattggaaatactgctgttttagtgactc 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcttgagcatgctgcaagtctcaagcctgtaattggaaatactgctgttttagtgactc 660
Query: 1502 ctttgatgacctga 1515
||||||||||||||
Sbjct: 661 ctttgatgacctga 674
>gnl|LJGI|TC67827
Length = 710
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 1 atgctcaagcaatccttcaacaagcttctccggaagtcgtcgaaacccgacccggacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgctcaagcaatccttcaacaagcttctccggaagtcgtcgaaacccgacccggacgag 552
Query: 61 ttggctcggagcgactcgttgcgttccactgactcgccacgcaccgccgggagaagccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttggctcggagcgactcgttgcgttccactgactcgccacgcaccgccgggagaagccag 612
Query: 121 cggccgcctggtgggagttcttccgctcgagcaaacgccacgaaacgagcttcgtcgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cggccgcctggtgggagttcttccgctcgagcaaacgccacgaaacgagcttcgtcgtcg 672
Query: 181 gcggtgttcccggcgagtatggtgtctgggatagagcc 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gcggtgttcccggcgagtatggtgtctgggatagagcc 710
>gnl|LJGI|TC69266 similar to UniRef100_A7P5G8 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (21%)
Length = 571
Score = 252 bits (127), Expect = 6e-66
Identities = 262/307 (85%)
Strand = Plus / Plus
Query: 1197 gaacaacgaccacattgtcaacttgattgcgcataaccgtcaagttatcctgcccatcat 1256
|||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 1 gaacaacgaccatattgtcaacttgattgcgcacaaccgtcaggtgatcctgcccatcat 60
Query: 1257 atttccagctctagataggaatattcaaagccactggaacccagcagttgtcaacttaac 1316
| |||||||| |||| |||||| ||||| |||||||||||| ||||| ||||||||||
Sbjct: 61 acttccagctttagaaaggaattctcaaaaccactggaacccggcagtgttcaacttaac 120
Query: 1317 tcataatattagaaaaatgttcttggagatggatgagaagctcttcatttcttgccattc 1376
|| ||| | ||||| |||||| ||||||||||||||||||| ||| | ||||| |||||
Sbjct: 121 acacaatgtcagaaagatgttcatggagatggatgagaagctgttcctgtcttgtcattc 180
Query: 1377 taactacaaggaggaagaagtgcttttaagctcagcagccgagaagcgaaaggaggcatg 1436
| | | ||||||||||||| | ||| ||| | |||||||||||| ||||| || ||
Sbjct: 181 tcagtttaaggaggaagaagaaatgctaaactcggaagccgagaagcggaaggaagcctg 240
Query: 1437 gaaacttcttgagcatgctgcaagtctcaagcctgtaattggaaatactgctgttttagt 1496
||||| || |||||||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 gaaacaactagagcatgcagccagtctcaagcctgtagttggaaatactgctgttttagt 300
Query: 1497 gactcct 1503
| |||||
Sbjct: 301 gtctcct 307
>gnl|LJGI|BW614928 similar to UniRef100_A7PEW0 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 458
Score = 168 bits (85), Expect = 6e-41
Identities = 190/225 (84%)
Strand = Plus / Plus
Query: 668 aggatcctagagaaagagattgcttgaagacaattctgcataggatttatgggaagttca 727
|||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 34 aggaccctagagaaagagattgcttgaaaacaattctgcatagaatctatgggaagttca 93
Query: 728 tggtgcataggcccttcattcgcaaatctattaacaacatattttatcgatttgtgattg 787
|||| || ||||| ||||| || |||||| ||| |||||| | || || ||||| | |
Sbjct: 94 tggttcacaggcctttcatgcggaaatctgttagcaacatcatctaccggtttgttttcg 153
Query: 788 agactgagagacacaatgggattggtgagctgttggagatttttgggagtgtgattagtg 847
||||| || | || || || |||| |||| |||||||||||||||||||||| |||||||
Sbjct: 154 agactcagcggcataacggaattgctgagttgttggagatttttgggagtgttattagtg 213
Query: 848 ggtttgctttacccttgaaagaggagcacaaaatcttcttgtgga 892
||||||| || || ||||| || ||||||||||| || |||||||
Sbjct: 214 ggtttgccttgccattgaaggaagagcacaaaatatttttgtgga 258
>gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 2025
Score = 83.8 bits (42), Expect = 3e-15
Identities = 186/234 (79%)
Strand = Plus / Plus
Query: 645 attgcttgaattgtttgaatcggaggatcctagagaaagagattgcttgaagacaattct 704
||||||||| |||||||| || ||||| || ||||| | || | |||||||| |||||
Sbjct: 871 attgcttgatttgtttgactctgaggacccgagagagcgtgagtatttgaagaccattct 930
Query: 705 gcataggatttatgggaagttcatggtgcataggcccttcattcgcaaatctattaacaa 764
|||| | || ||||| ||||||||||| || || |||||||| | || | ||||||||
Sbjct: 931 gcatcgtatatatggcaagttcatggttcacagacccttcatcaggaaggccattaacaa 990
Query: 765 catattttatcgatttgtgattgagactgagagacacaatgggattggtgagctgttgga 824
||| |||||||| ||| | |||||| |||||||||| || ||||| ||||| ||||
Sbjct: 991 catcttttatcggtttatatatgagaccgagagacacagcggtattggggagcttctgga 1050
Query: 825 gatttttgggagtgtgattagtgggtttgctttacccttgaaagaggagcacaa 878
|||| ||||||| | |||| ||| ||||| || ||| |||| |||||||||||
Sbjct: 1051 gattcttgggagcatcattaatggatttgcattgcccatgaaggaggagcacaa 1104