Miyakogusa Predicted Gene

Lj5g3v0539650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0539650.1 Non Chatacterized Hit- tr|K3YW60|K3YW60_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018492,49.57,3e-19,DUF4050,Domain of unknown function
DUF4050,CUFF.53278.1
         (423 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76388                                                      839   0.0  

>gnl|LJGI|TC76388 
          Length = 729

 Score =  839 bits (423), Expect = 0.0
 Identities = 423/423 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgaggcatctaaaggactaagaaatcaaggtcaaacagtgactaaagatgatgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atggatgaggcatctaaaggactaagaaatcaaggtcaaacagtgactaaagatgatgga 146

                                                                       
Query: 61  tcatcagatttctggagcagcaacactatcgaaatggatcataatgcagctcagtcgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tcatcagatttctggagcagcaacactatcgaaatggatcataatgcagctcagtcgctg 206

                                                                       
Query: 121 agaagcgtctcatcaactgcaacatcaaattatccttctgatccccaaagtagtgcatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agaagcgtctcatcaactgcaacatcaaattatccttctgatccccaaagtagtgcatgc 266

                                                                       
Query: 181 agtcaaactgctcctcctgaatttgtcaaccatgggcttcttcactggtaccagatgagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agtcaaactgctcctcctgaatttgtcaaccatgggcttcttcactggtaccagatgagg 326

                                                                       
Query: 241 caacaatgggttggaaataaaacctctgagagtcagacagaagttcgagaaccaaaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caacaatgggttggaaataaaacctctgagagtcagacagaagttcgagaaccaaaaata 386

                                                                       
Query: 301 agtttgaatgccacctacgacaatctacttggaaacaacaagccctttccccaacccatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtttgaatgccacctacgacaatctacttggaaacaacaagccctttccccaacccatc 446

                                                                       
Query: 361 cctttgagagaaatggtatactttcttgttgatatttgggagcaagagggtctatatgac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cctttgagagaaatggtatactttcttgttgatatttgggagcaagagggtctatatgac 506

              
Query: 421 tga 423
           |||
Sbjct: 507 tga 509