Miyakogusa Predicted Gene
- Lj5g3v0529460.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0529460.2 Non Chatacterized Hit- tr|C6TH49|C6TH49_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4 S,63.51,4e-18,no
description,NULL; FAMILY NOT NAMED,NULL; Ubiquitin-like,NULL;
seg,NULL,CUFF.53232.2
(810 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70195 similar to UniRef100_A7P5U9 Cluster: Chromosome... 1076 0.0
gnl|LJGI|GO028021 similar to UniRef100_A7P5U9 Cluster: Chromosom... 547 e-155
>gnl|LJGI|TC70195 similar to UniRef100_A7P5U9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 820
Score = 1076 bits (543), Expect = 0.0
Identities = 543/543 (100%)
Strand = Plus / Plus
Query: 1 atggccgaaactagcttgattctcaccaccaccaccgagaaaatcaaatcacgaaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atggccgaaactagcttgattctcaccaccaccaccgagaaaatcaaatcacgaaagctg 219
Query: 61 ctgcaattctcaacaatttccatcatcgataccattttcgccaaaaagagcttcctctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ctgcaattctcaacaatttccatcatcgataccattttcgccaaaaagagcttcctctat 279
Query: 121 ggcaagcttccttcccaacccttcaggctctctgtcctcaaattggacggttcttccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggcaagcttccttcccaacccttcaggctctctgtcctcaaattggacggttcttccttt 339
Query: 181 gatattcaagtttcaaagacggcgagtattgcagagcttaaggatgcagtggaagcggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatattcaagtttcaaagacggcgagtattgcagagcttaaggatgcagtggaagcggtt 399
Query: 241 tttagtcacatgcctgagaagggaccagcaaaaatttcatggccacatgtttggggccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tttagtcacatgcctgagaagggaccagcaaaaatttcatggccacatgtttggggccag 459
Query: 301 ttttgcttatgctatgatgggcagaagctagttacggaggaggattatcttagaaattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttttgcttatgctatgatgggcagaagctagttacggaggaggattatcttagaaattat 519
Query: 361 ggcatcaaggatggtgacgagctacatttcatgcgccatgtctcaaacaattgcactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggcatcaaggatggtgacgagctacatttcatgcgccatgtctcaaacaattgcactgtt 579
Query: 421 aggagaaagcggccaaagaaaagagttctccgtttgaaaaaacgaaggaggtccaggtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aggagaaagcggccaaagaaaagagttctccgtttgaaaaaacgaaggaggtccaggtca 639
Query: 481 tcgcaagttaatagctgtgaacccgaagaaaattgcaatgatggtgaagttagttctgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tcgcaagttaatagctgtgaacccgaagaaaattgcaatgatggtgaagttagttctgat 699
Query: 541 ggg 543
|||
Sbjct: 700 ggg 702
Score = 87.7 bits (44), Expect = 1e-16
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 603 gcatgttgggaagaacaagttaactggcattgtaggagagctgttctcatgcaccc 658
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 763 gcatgttgggaagaacaagt-aactggcattgtaagagagctgttctcatgcaccc 817
>gnl|LJGI|GO028021 similar to UniRef100_A7P5U9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 857
Score = 547 bits (276), Expect = e-155
Identities = 297/300 (99%), Gaps = 3/300 (1%)
Strand = Plus / Minus
Query: 244 agtcacatgcctgagaagggaccagcaaaaatttcatggccacatgtttggggccagttt 303
|||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 857 agtcacatgc-tgagaagg-accagcaaaaatt-catggccacatgtttggggccagttt 801
Query: 304 tgcttatgctatgatgggcagaagctagttacggaggaggattatcttagaaattatggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgcttatgctatgatgggcagaagctagttacggaggaggattatcttagaaattatggc 741
Query: 364 atcaaggatggtgacgagctacatttcatgcgccatgtctcaaacaattgcactgttagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcaaggatggtgacgagctacatttcatgcgccatgtctcaaacaattgcactgttagg 681
Query: 424 agaaagcggccaaagaaaagagttctccgtttgaaaaaacgaaggaggtccaggtcatcg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agaaagcggccaaagaaaagagttctccgtttgaaaaaacgaaggaggtccaggtcatcg 621
Query: 484 caagttaatagctgtgaacccgaagaaaattgcaatgatggtgaagttagttctgatggg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caagttaatagctgtgaacccgaagaaaattgcaatgatggtgaagttagttctgatggg 561
Score = 396 bits (200), Expect = e-110
Identities = 206/208 (99%)
Strand = Plus / Minus
Query: 603 gcatgttgggaagaacaagttaactggcattgtaggagagctgttctcatgcaccccact 662
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gcatgttgggaagaacaagttaactggcattgtcggagagctgttctcatgcaccccact 442
Query: 663 agcggttgtgagaaaagctaaatctaaaagcaggagttggtcatctacgattcccagatg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcggttgtgagaaaagctaaatctaaaagcaggagttggtcatctacgattcccagatg 382
Query: 723 tttactgggcagtttcagaaagattagaaggattgtgtgctttggccgaaggaggcacta 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tttactgggcagtttcagaaagattagaaggattgtgtgctttggccgaaggaggtacta 322
Query: 783 ttctatgagacttacatggagtgagtaa 810
||||||||||||||||||||||||||||
Sbjct: 321 ttctatgagacttacatggagtgagtaa 294