Miyakogusa Predicted Gene

Lj5g3v0529440.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0529440.1 Non Chatacterized Hit- tr|I3S1U1|I3S1U1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,69.28,0,Cyclin_N,Cyclin, N-terminal; no description,Cyclin-like;
domain present in cyclins, TFIIB and Retino,CUFF.53234.1
         (600 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AW164148 weakly similar to UniRef100_Q2PHL0 Cluster: Cy...   462   e-129
gnl|LJGI|TC69828 homologue to UniRef100_P93557 Cluster: Mitotic ...   101   5e-21

>gnl|LJGI|AW164148 weakly similar to UniRef100_Q2PHL0 Cluster: Cyclin B1-1; n=1;
           Daucus carota|Rep: Cyclin B1-1 - Daucus carota (Carrot),
           partial (11%)
          Length = 339

 Score =  462 bits (233), Expect = e-129
 Identities = 240/241 (99%), Gaps = 1/241 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcacccaacatcatcgttccgaccaaagaggaaaggaaccggataatacttggt 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggcttcacc-aacatcatcgttccgaccaaagaggaaaggaaccggataatacttggt 158

                                                                       
Query: 61  gatattggaaacggaagaaccctaagagaagttgatatcaacaccaatttctgtcaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gatattggaaacggaagaaccctaagagaagttgatatcaacaccaatttctgtcaccaa 218

                                                                       
Query: 121 ccacttgccactcaaaagaaaccgaatgagcaaattgttgacaatattgatgctgctgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ccacttgccactcaaaagaaaccgaatgagcaaattgttgacaatattgatgctgctgat 278

                                                                       
Query: 181 gttcacaatgagcttgctgctgtggaatatattcaagacatatacaagttctataagacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gttcacaatgagcttgctgctgtggaatatattcaagacatatacaagttctataagacg 338

            
Query: 241 g 241
           |
Sbjct: 339 g 339


>gnl|LJGI|TC69828 homologue to UniRef100_P93557 Cluster: Mitotic cyclin; n=1;
           Sesbania rostrata|Rep: Mitotic cyclin - Sesbania
           rostrata, partial (34%)
          Length = 722

 Score =  101 bits (51), Expect = 5e-21
 Identities = 101/117 (86%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 139 aaaccgaatgagcaaattgttgacaatattgatgctgctgatgttcacaatgagcttgct 198
           |||||||| ||| | ||||||||||   ||||||||  ||||||| ||||||| ||||||
Sbjct: 609 aaaccgaaagaggagattgttgaca---ttgatgctagtgatgttgacaatgaacttgct 665

                                                                    
Query: 199 gctgtggaatatattcaagacatatacaagttctataagacggttgagaatgagagc 255
           |||||||| || ||| |||| || |||||||||||||||| ||||||||||||||||
Sbjct: 666 gctgtggagtacattgaagatatctacaagttctataagatggttgagaatgagagc 722