Miyakogusa Predicted Gene
- Lj5g3v0529190.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0529190.2 tr|G7KD27|G7KD27_MEDTR Ribosomal RNA small
subunit methyltransferase B OS=Medicago truncatula
GN=MTR,47.5,0.008,seg,NULL,CUFF.53237.2
(546 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcrip... 367 e-101
gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 prote... 260 8e-69
gnl|LJGI|FS332356 similar to UniRef100_UPI00005F83E6 Cluster: CO... 244 5e-64
>gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcription factor; n=1;
Vicia faba var. minor|Rep: Transcription factor - Vicia
faba var. minor, partial (23%)
Length = 553
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 atgaaaatgactccctttccgagaatcgcgacaggatcaatgagcaagctgattctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgaaaatgactccctttccgagaatcgcgacaggatcaatgagcaagctgattctccac 428
Query: 61 ctctggtggcttctctgtcttagataccagcatggattcagggtgaagaggagcacagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctctggtggcttctctgtcttagataccagcatggattcagggtgaagaggagcacagcg 488
Query: 121 gtgtatccagcaagtcgtccttttcctcctctgattctcaccatcgatgaaaacgatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgtatccagcaagtcgtccttttcctcctctgattctcaccatcgatgaaaacgatttt 548
Query: 181 gggtg 185
|||||
Sbjct: 549 gggtg 553
>gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 protein; n=1; Lupinus
albus|Rep: TCP1 protein - Lupinus albus (White lupin),
partial (7%)
Length = 795
Score = 260 bits (131), Expect = 8e-69
Identities = 158/167 (94%)
Strand = Plus / Plus
Query: 3 gaaaatgactccctttccgagaatcgcgacaggatcaatgagcaagctgattctccacct 62
||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaaaatgacgcccttgccgagaaccgcgacaggatcaatgagcaagctgattctccacct 605
Query: 63 ctggtggcttctctgtcttagataccagcatggattcagggtgaagaggagcacagcggt 122
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctggtggcttctctgccttcgataccagcatggattcagggtgaagaggagcacagcggt 665
Query: 123 gtatccagcaagtcgtccttttcctcctctgattctcaccatcgatg 169
|||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 666 gtatccgacaagtcgtccttttcctcctctgattctcgccattgatg 712
>gnl|LJGI|FS332356 similar to UniRef100_UPI00005F83E6 Cluster: COG0697: Permeases of
the drug/metabolite transporter (DMT) superfamily; n=1;
Yersinia mollaretii ATCC 43969|Rep: COG0697: Permeases
of the drug/metabolite transporter (DMT) superfamily -
Yersinia mollaretii ATCC 43969, partial (5%)
Length = 729
Score = 244 bits (123), Expect = 5e-64
Identities = 176/193 (91%), Gaps = 3/193 (1%)
Strand = Plus / Plus
Query: 178 tttgggtgtttcatctgtcatctaaaagcaaggagggcgagtgaagcagcaagcaccatt 237
||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 509 tttgggtattttatctgtcatctaaaagcgatgagggcgagtgaagcagcaagcaccatt 568
Query: 238 gaacaccgagtggtgaaccctttgaatgagtgtcacggtttcgatgctgctcctttttcc 297
|||| || | ||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 569 gaacgccaattggtgaaccctttgaatgagtctcacggtttcgatgctgctc---tttcc 625
Query: 298 atgttccgcgttcctaacctcgattatgtggtgcttttttggtgttcaacaccgcagcac 357
|||| ||||||||||||||||||||||| | | || |||||||||||||||||||||||
Sbjct: 626 atgtggcgcgttcctaacctcgattatgtcgcgtttctttggtgttcaacaccgcagcac 685
Query: 358 attgattatggtg 370
|||||||||||||
Sbjct: 686 attgattatggtg 698