Miyakogusa Predicted Gene

Lj5g3v0528890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0528890.1 Non Chatacterized Hit- tr|H2SQ10|H2SQ10_TAKRU
Uncharacterized protein (Fragment) OS=Takifugu
rubripe,28.45,0.5,seg,NULL,CUFF.53176.1
         (409 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67385 similar to UniRef100_Q750N8 Cluster: AGL088Cp; ...   747   0.0  

>gnl|LJGI|TC67385 similar to UniRef100_Q750N8 Cluster: AGL088Cp; n=1; Eremothecium
           gossypii|Rep: AGL088Cp - Ashbya gossypii (Yeast)
           (Eremothecium gossypii), partial (7%)
          Length = 638

 Score =  747 bits (377), Expect = 0.0
 Identities = 401/409 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtttcatcattctcatacccacaatgaaccctagctctccctttcatgataaatct 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgtgtttcatcattctcagacccacaatgaaccctagctctccctttcatgataaatct 222

                                                                       
Query: 61  ggcaccgcccctccaagaaccaaagggggatcaagaacaagagagatgaaggatcgaacc 120
           |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 223 ggcaccgccccttcaagaaccagagggggatcaagaacaagagagatgaaggatcgaacc 282

                                                                       
Query: 121 tggacgctgaacgtgaacctcacgcctccaaacacttcgacctcgggttcagatatggtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tggacgctgaacgtgaacctcacgcctccaaacacttcgacctcgggttcagatatggtg 342

                                                                       
Query: 181 gcggtgatagtgttggggcggcgaagaaccctaagcggccacgtgaaggaaggagagggg 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 343 gcggtgatagtgttggggcggcgaagaaccctaagcggccgcgtgaaggaaggagagggg 402

                                                                       
Query: 241 aagagaagaaggttgggcttggggaagacggaccatcttccatgcagtcagcgattgagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aagagaagaaggttgggcttggggaagacggaccatcttccatgcagtcagcgattgagc 462

                                                                       
Query: 301 cgccagatccagatcgtggttttctttctctctctcaaccactccttctccttgcttcgt 360
           |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 463 cgccagatccagatcggggttttctttctctctttcagccactccttctccttgcttcgt 522

                                                            
Query: 361 ttgctccagctcccaaacatgttgtgtgatggggtttctattttgtgat 409
           |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttgctctagctcccaaacatgttgtgtgatggggtttctattttgtgat 571