Miyakogusa Predicted Gene

Lj5g3v0528880.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0528880.2 Non Chatacterized Hit- tr|F6H3V1|F6H3V1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,79.63,0,seg,NULL; GB DEF: HYPOTHETICAL PROTEIN T5K6_30,NULL;
FAMILY NOT NAMED,NULL; TRAPPC9-Trs120,TRAPP II ,CUFF.53331.2
         (3606 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP064366 similar to UniRef100_A7P5Z9 Cluster: Chromosom...  1027   0.0  

>gnl|LJGI|BP064366 similar to UniRef100_A7P5Z9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 535

 Score = 1027 bits (518), Expect = 0.0
 Identities = 528/530 (99%), Gaps = 1/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  ctcgatgctgctcccactgcactcgatcccgctctccgcgatcagttccttctacacgga 155
           ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 7   ctcgatgctgctcccactgcactcgattc-gctctccgcgatcagttccttctacacgga 65

                                                                       
Query: 156 gcaccagaaatcgccgttcgcgaatcagccctgggacaccggttcgctcagcttcaaatt 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  gcaccagaaatcgccgttcgcgaatcagccctgggacaccggttcgctcagcttcaaatt 125

                                                                       
Query: 216 cgtcctcggcggcgctccgccgagtccctgggaggatttccagtcctaccggaaaaccct 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cgtcctcggcggcgctccgccgagtccctgggaggatttccagtcctaccggaaaaccct 185

                                                                       
Query: 276 cgctgttgttggcattgttcactgcccttcctcgccggatctcgacgccgttgttgatca 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cgctgttgttggcattgttcactgcccttcctcgccggatctcgacgccgttgttgatca 245

                                                                       
Query: 336 gtttgctagcgcctgcaagtcttacccttcgtctctcgtcgatcgctgcttcgccttctg 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtttgctagcgcctgcaagtcttacccttcgtctctcgtcgatcgctgcttcgccttctg 305

                                                                       
Query: 396 ccccaatgattctcagcttgatgatggaagtaagagagaggggaatttgaggttgtttcc 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccccaatgattctcagcttgatgatggaagtaagagagaggggaatttgaggttgtttcc 365

                                                                       
Query: 456 tccagcggatcgtccgacattggaatttcacttgaacactatgatgcaagaagtagctgc 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tccagcggatcgtccgacattggaatttcacttgaacactatgatgcaagaagtagctgc 425

                                                                       
Query: 516 ttcgctgcttatggagtttgagaaatgggtgcttcaggcggaatcttctggaacaattct 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttcgctgcttatggagtttgagaaatgggtgcttcaggcggaatcttctggaacaattct 485

                                                             
Query: 576 caagacgcctttggattctcaagctagtctcagctcagaggaggtaatta 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caagacgcctttggattctcaagctagtctcagctcagaggaggtaatta 535