Miyakogusa Predicted Gene
- Lj5g3v0527610.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0527610.2 Non Chatacterized Hit- tr|I1LAB4|I1LAB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.73,0,MATE EFFLUX
FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL; MatE,Multi
antimicrobial extrusi,CUFF.53158.2
(1521 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70306 similar to UniRef100_A7Q2A7 Cluster: Chromosome... 745 0.0
gnl|LJGI|TC64803 similar to UniRef100_A7NZR1 Cluster: Chromosome... 553 e-156
gnl|LJGI|TC61885 similar to UniRef100_A7NZR1 Cluster: Chromosome... 553 e-156
gnl|LJGI|BW598393 similar to UniRef100_A7PWC6 Cluster: Chromosom... 460 e-128
>gnl|LJGI|TC70306 similar to UniRef100_A7Q2A7 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 755
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 1 atgccccttctggtgttattttctggcataagaaatgttctcaaaaaggatgaactaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgccccttctggtgttattttctggcataagaaatgttctcaaaaaggatgaactaggc 232
Query: 61 ctggaaataatgcagatttcagtccctaccattctggctttagcagcagatcctattgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctggaaataatgcagatttcagtccctaccattctggctttagcagcagatcctattgct 292
Query: 121 tctttgattgatactgcattcatcggccacataggtcctgtggagcttgcggctgtggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tctttgattgatactgcattcatcggccacataggtcctgtggagcttgcggctgtggga 352
Query: 181 gtttcaattgctattttcaatcaagtctcgaaaattgcaataattccacttgtcagtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtttcaattgctattttcaatcaagtctcgaaaattgcaataattccacttgtcagtgtt 412
Query: 241 acaacctctttggttgctgaggaggatgctaccgatatgttacaaactcaaccaccagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acaacctctttggttgctgaggaggatgctaccgatatgttacaaactcaaccaccagaa 472
Query: 301 aaagaaatgttgatcaaggtctcttctgttgatgaggaaagaaagttggaagtagaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aaagaaatgttgatcaaggtctcttctgttgatgaggaaagaaagttggaagtagaagac 532
Query: 361 aatatagagcaagatg 376
||||||||||||||||
Sbjct: 533 aatatagagcaagatg 548
Score = 75.8 bits (38), Expect = 7e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 376 gatcccgaatgcagcacgtcacaaactcatattgacag 413
||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gatcccgaatgcagcacgtcacaaactcatattgacag 755
>gnl|LJGI|TC64803 similar to UniRef100_A7NZR1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (30%)
Length = 676
Score = 553 bits (279), Expect = e-156
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1243 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 278
Query: 1303 ggagcttcagatttcatatactctgcttactcaatgattatggtggcattggtgagcata 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggagcttcagatttcatatactctgcttactcaatgattatggtggcattggtgagcata 338
Query: 1363 tatatcttatatatgttatcctcaagccttggcatgactggtatctggattgcgttgtct 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatatcttatatatgttatcctcaagccttggcatgactggtatctggattgcgttgtct 398
Query: 1423 atatacatgagcctaagggtgtttgctggcttttggagaattggtactggatcaggacct 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atatacatgagcctaagggtgtttgctggcttttggagaattggtactggatcaggacct 458
Query: 1483 tggagcttccttaaggataactttgcaagaccccaataa 1521
|||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tggagcttccttaaggataactttgcaagaccccaataa 497
Score = 404 bits (204), Expect = e-112
Identities = 213/216 (98%)
Strand = Plus / Plus
Query: 910 gttgcagctgtgacatcatgtgtgaccttgtcagcatccctagcagcaaggcaaggatca 969
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gttgtagctgtgacatcatgtgtgaccttgtcagcatccctagcagcaaggcaaggatca 62
Query: 970 acagtgatggctgcgttccaaatctgcttacagatttggatggcaacctctttgcttact 1029
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 acagtggtggctgcgttccaaatctgcttacagatttggatggcaacctctttgcttact 122
Query: 1030 gatggattggctgttgctggacaagccattattgcaagtgcatttgcaagaagggattac 1089
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123 gatggattggctgttgctggacaagccgttattgcaagtgcatttgcaagaagggattac 182
Query: 1090 agcaaggtcatatcatctacttcacgtgtgctgcag 1125
||||||||||||||||||||||||||||||||||||
Sbjct: 183 agcaaggtcatatcatctacttcacgtgtgctgcag 218
>gnl|LJGI|TC61885 similar to UniRef100_A7NZR1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 799
Score = 553 bits (279), Expect = e-156
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1243 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 382
Query: 1303 ggagcttcagatttcatatactctgcttactcaatgattatggtggcattggtgagcata 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggagcttcagatttcatatactctgcttactcaatgattatggtggcattggtgagcata 442
Query: 1363 tatatcttatatatgttatcctcaagccttggcatgactggtatctggattgcgttgtct 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatatcttatatatgttatcctcaagccttggcatgactggtatctggattgcgttgtct 502
Query: 1423 atatacatgagcctaagggtgtttgctggcttttggagaattggtactggatcaggacct 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atatacatgagcctaagggtgtttgctggcttttggagaattggtactggatcaggacct 562
Query: 1483 tggagcttccttaaggataactttgcaagaccccaataa 1521
|||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggagcttccttaaggataactttgcaagaccccaataa 601
Score = 234 bits (118), Expect = 1e-60
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1122 gcagcttggcttgattctagggttggtactttcattccttctatttagcctactaccatt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gcagcttggcttgattctagggttggtactttcattccttctatttagcctactaccatt 140
Query: 1182 tgcttctaagttatttacaaatgacatcaatgttctgcaacttatcagtattactatt 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgcttctaagttatttacaaatgacatcaatgttctgcaacttatcagtattactatt 198
>gnl|LJGI|BW598393 similar to UniRef100_A7PWC6 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 465
Score = 460 bits (232), Expect = e-128
Identities = 235/236 (99%)
Strand = Plus / Plus
Query: 890 ggtttctattaatgattaaagttgcagctgtgacatcatgtgtgaccttgtcagcatccc 949
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 163 ggtttctattaatgattaaagttgtagctgtgacatcatgtgtgaccttgtcagcatccc 222
Query: 950 tagcagcaaggcaaggatcaacagtgatggctgcgttccaaatctgcttacagatttgga 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tagcagcaaggcaaggatcaacagtgatggctgcgttccaaatctgcttacagatttgga 282
Query: 1010 tggcaacctctttgcttactgatggattggctgttgctggacaagccattattgcaagtg 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tggcaacctctttgcttactgatggattggctgttgctggacaagccattattgcaagtg 342
Query: 1070 catttgcaagaagggattacagcaaggtcatatcatctacttcacgtgtgctgcag 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 catttgcaagaagggattacagcaaggtcatatcatctacttcacgtgtgctgcag 398
Score = 248 bits (125), Expect = 9e-65
Identities = 152/163 (93%), Gaps = 11/163 (6%)
Strand = Plus / Plus
Query: 638 tgcaaggagtttttcgaggaatcaaagatacaagaactcctttgtatgctacaatt---- 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaaggagtttttcgaggaatcaaagatacaagaactcctttgtatgctacaatttaac 60
Query: 694 -------gtgggagatttagcaaatatcattttagatccattacttatatttgtagtccg 746
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcagttgtgggagatttagcaaatatcattttagatccattacttatatttgtagtccg 120
Query: 747 gttgggagtcagtggggccgccattgctcatattatctcccag 789
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgggagtcagtggggccgccattgctcatattatctcccag 163
Score = 133 bits (67), Expect = 4e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1243 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tatgtagcagccactcaacccatcaatgcgctagcatttgtttttgatggagttaactat 458
Query: 1303 ggagctt 1309
|||||||
Sbjct: 459 ggagctt 465