Miyakogusa Predicted Gene
- Lj5g3v0526490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0526490.1 Non Chatacterized Hit- tr|I3SR78|I3SR78_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,31.36,4e-19,MAM33,Mitochondrial glycoprotein; seg,NULL;
Mitochondrial glycoprotein MAM33-like,Mitochondrial glyc,CUFF.53151.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68798 weakly similar to UniRef100_A7P5Y6 Cluster: Chr... 1088 0.0
gnl|LJGI|TC75774 weakly similar to UniRef100_A7P5Y6 Cluster: Chr... 975 0.0
gnl|LJGI|GO019481 similar to UniRef100_A7P5Y6 Cluster: Chromosom... 432 e-120
>gnl|LJGI|TC68798 weakly similar to UniRef100_A7P5Y6 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (48%)
Length = 575
Score = 1088 bits (549), Expect = 0.0
Identities = 559/561 (99%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 1 atggcttccctcattcgagtggttcgaaagaaaatcagtagtagctgttgttcatcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 atggcttccctcattcgagtggttcgaaagaaaatcagtagtagctgttgttcatcttca 75
Query: 61 tgggcggttgcgagaacactgagagtgaggaacggtaccttgggtttcgccagcagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tgggcggttgcgagaacactgagagtgaggaacggtaccttgggtttcgccagcagaggt 135
Query: 121 tacgcagaagtagcagcggttaaatctccatttgaatccaacattttacgagttctccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tacgcagaagtagcagcggttaaatctccatttgaatccaacattttacgagttctccgg 195
Query: 181 aacgagatcgagtaccaggccgagtacgctcctccacaccagcctgagacgaaattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 aacgagatcgagtaccaggccgagtacgctcctccacaccagcctgagacgaaattcaat 255
Query: 241 tcgtatacggttgaagagcgacctggagagcaggtgattacattgaaggggaggtttggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 256 tcgtatacggttgaagagcgacctggagagcaggtgattacattgaaggggagggttggg 315
Query: 301 gacagggaagatatcaaaatcgaagctactatgtttgatgggtatgagcacattacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gacagggaagatatcaaaatcgaagctactatgtttgatgggtatgagcacattacggtg 375
Query: 361 cctggagatgacagttctggggcagatgtgcgacttcacctcagtctactggtggatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctggagatgacagttctggggcagatgtgcgacttcacctcagtctactggtggatata 435
Query: 421 tccaagggggaaggtggcagtgaattggaatttgtctgctcagcatggccagattgttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tccaagggggaaggtggcagtgaattggaatttgtctgctcagcatggccagattgttta 495
Query: 481 gatgttgagaaagtttacatattaaggcgtggtcatatgccaactaggcctttcctggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gatgttgagaaagtttacatattaaggcgtggtcatatgccaactaggcctttcctggga 555
Query: 541 cctaatttcagggacctgaat 561
|||||||||| ||||||||||
Sbjct: 556 cctaatttca-ggacctgaat 575
>gnl|LJGI|TC75774 weakly similar to UniRef100_A7P5Y6 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 1154
Score = 975 bits (492), Expect = 0.0
Identities = 492/492 (100%)
Strand = Plus / Plus
Query: 220 cagcctgagacgaaattcaattcgtatacggttgaagagcgacctggagagcaggtgatt 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcctgagacgaaattcaattcgtatacggttgaagagcgacctggagagcaggtgatt 324
Query: 280 acattgaaggggaggtttggggacagggaagatatcaaaatcgaagctactatgtttgat 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acattgaaggggaggtttggggacagggaagatatcaaaatcgaagctactatgtttgat 384
Query: 340 gggtatgagcacattacggtgcctggagatgacagttctggggcagatgtgcgacttcac 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggtatgagcacattacggtgcctggagatgacagttctggggcagatgtgcgacttcac 444
Query: 400 ctcagtctactggtggatatatccaagggggaaggtggcagtgaattggaatttgtctgc 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcagtctactggtggatatatccaagggggaaggtggcagtgaattggaatttgtctgc 504
Query: 460 tcagcatggccagattgtttagatgttgagaaagtttacatattaaggcgtggtcatatg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagcatggccagattgtttagatgttgagaaagtttacatattaaggcgtggtcatatg 564
Query: 520 ccaactaggcctttcctgggacctaatttcagggacctgaatcctaaggttcaggaaaag 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaactaggcctttcctgggacctaatttcagggacctgaatcctaaggttcaggaaaag 624
Query: 580 tttcgtgagtacttggacacaaggggagtaaatgatgaactagctgctttcttacatgat 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttcgtgagtacttggacacaaggggagtaaatgatgaactagctgctttcttacatgat 684
Query: 640 tatatgctgaacaaggatagaattgagcttctacggtggatggatagcctcaagtctttt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatatgctgaacaaggatagaattgagcttctacggtggatggatagcctcaagtctttt 744
Query: 700 gtggaaaaatag 711
||||||||||||
Sbjct: 745 gtggaaaaatag 756
>gnl|LJGI|GO019481 similar to UniRef100_A7P5Y6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 438
Score = 432 bits (218), Expect = e-120
Identities = 221/222 (99%)
Strand = Plus / Plus
Query: 1 atggcttccctcattcgagtggttcgaaagaaaatcagtagtagctgttgttcatcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atggcttccctcattcgagtggttcgaaagaaaatcagtagtagctgttgttcatcttca 157
Query: 61 tgggcggttgcgagaacactgagagtgaggaacggtaccttgggtttcgccagcagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgggcggttgcgagaacactgagagtgaggaacggtaccttgggtttcgccagcagaggt 217
Query: 121 tacgcagaagtagcagcggttaaatctccatttgaatccaacattttacgagttctccgg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tacgcagaagtatcagcggttaaatctccatttgaatccaacattttacgagttctccgg 277
Query: 181 aacgagatcgagtaccaggccgagtacgctcctccacaccag 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aacgagatcgagtaccaggccgagtacgctcctccacaccag 319