Miyakogusa Predicted Gene
- Lj5g3v0526290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0526290.1 Non Chatacterized Hit- tr|B4G0B8|B4G0B8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,78.85,4e-16,seg,NULL,NODE_36032_length_743_cov_86.158813.path2.1
(744 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63347 similar to UniRef100_A7QEE4 Cluster: Chromosome... 1411 0.0
gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome... 833 0.0
>gnl|LJGI|TC63347 similar to UniRef100_A7QEE4 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 866
Score = 1411 bits (712), Expect = 0.0
Identities = 733/736 (99%), Gaps = 3/736 (0%)
Strand = Plus / Plus
Query: 1 atgctagttgcttcttcatcaccctgcgttctcttcgatttccagaagctttcttcctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atgctagttgcttcttcatcaccctgcgttctcttcgatttccagaagctttcttcctac 129
Query: 61 acaaccttctcaaaacaaacccggacttttcttttcagcagcagacatacaaacttccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 acaaccttctcaaaacaaacccggacttttcttttcagcagcagacatacaaacttccgt 189
Query: 121 tttcctttgacttccaaaaggagtcttcctccactttgcttcttcaactctcaagacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttcctttgacttccaaaaggagtcttcctccactttgcttcttcaactctcaagacaaa 249
Query: 181 tctaacccaaagattccggacaaggaacctggattggagtggcctattctcaggcgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctaacccaaagattccggacaaggaacctggattggagtggcctattctcaggcgatgg 309
Query: 241 gaggtaccttgggaatggcaaacagtttcgttaacgtctctcgcttgtggattgggtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaggtaccttgggaatggcaaacagtttcgttaacgtctctcgcttgtggattgggtttt 369
Query: 301 gtgttgacaggtttggttgaggcaacagctctaccatatctagggattaaacctgatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgttgacaggtttggttgaggcaacagctctaccatatctagggattaaacctgatgtg 429
Query: 361 ctaagcttagatgagaagtctgagatactgtttcttgatcagggcatcacaactgctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctaagcttagatgagaagtctgagatactgtttcttgatcagggcatcacaactgctgtt 489
Query: 421 gtacttggaatcatatatactgttgccaacactttccagccactccctgaagacttcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtacttggaatcatatatactgttgccaacactttccagccactccctgaagacttcttc 549
Query: 481 aaatatgatttgagggaacctttcaatcttcaaaagggttggcttttgtgggcaggagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aaatatgatttgagggaacctttcaatcttcaaaagggttggcttttgtgggcaggagtt 609
Query: 541 ggacttattggtgccctagctgccattgcattgacaggagttgctgtgtccttctttaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggacttattggtgccctagctgccattgcattgacaggagttgctgtgtccttctttaat 669
Query: 601 ggagaaaccccagagagagagactgatgctcttgttcgcttgcttccattaattgggtca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ggagaaaccccagagagagagactgatgctcttgttcgcttgcttccattaattgggtca 729
Query: 661 tcaaatctcagcactgcttgcttggtcggcattgttggagttcttgctccactccttgag 720
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 730 tcaaatctcagcactgcttgcttggtc-gcattgttggag-tcttgctccactccttga- 786
Query: 721 gagactgtatttcgag 736
||||||||||||||||
Sbjct: 787 gagactgtatttcgag 802
>gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 988
Score = 833 bits (420), Expect = 0.0
Identities = 465/472 (98%), Gaps = 6/472 (1%)
Strand = Plus / Plus
Query: 272 taacgtctctcgcttgtggattgggttttgtgttgacaggtttggttgaggcaacagctc 331
|||||||||||||| ||| ||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 42 taacgtctctcgct-gtg-attgggttt-gtgt-gacaggtt-ggttgaggcaacagctc 96
Query: 332 taccatatctagggattaaacctgatgtgctaagcttagatgagaagtctgagatactgt 391
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 97 taccatatctagggattaaac-tgatgtgctaagcttagatgagaagtctgagatactgt 155
Query: 392 ttcttgatcagggcatcacaactgctgttgtacttggaatcatatatactgttgccaaca 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttcttgatcagggcatcacaactgctgttgtacttggaatcatatatactgttgccaaca 215
Query: 452 ctttccagccactccctgaagacttcttcaaatatgatttgagggaacctttcaatcttc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctttccagccactccctgaagacttcttcaaatatgatttgagggaacctttcaatcttc 275
Query: 512 aaaagggttggcttttgtgggcaggagttggacttattggtgccctagctgccattgcat 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaagggttggcttttgtgggcaggagttggacttattggtgccctagctgccattgcat 335
Query: 572 tgacaggagttgctgtgtccttctttaatggagaaaccccagagagagagactgatgctc 631
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 336 tgacaggagttgctgtgtccttctttaatggagaaaccccagagggagagactgatgctc 395
Query: 632 ttgttcgcttgcttccattaattgggtcatcaaatctcagcactgcttgcttggtcggca 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttgttcgcttgcttccattaattgggtcatcaaatctcagcactgcttgcttggtcggca 455
Query: 692 ttgttggagttcttgctccactccttgaggagactgtatttcgaggcttttt 743
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttgttggagttcttgctccactccttgaggagactgtatttcgaggcttttt 507