Miyakogusa Predicted Gene
- Lj5g3v0523200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0523200.1 Non Chatacterized Hit- tr|I1MWY8|I1MWY8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19802
PE,56.7,0,TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED,NULL; RESPONSE
REGULATOR OF TWO-COMPONENT SYSTEM,NULL;,CUFF.53130.1
(1983 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 2545 0.0
gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chr... 739 0.0
gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 230 3e-59
gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome... 230 3e-59
gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosom... 208 1e-52
gnl|LJGI|TC80401 similar to UniRef100_A7R0P8 Cluster: Chromosome... 80 6e-14
gnl|LJGI|DC593459 homologue to UniRef100_A7Q8K8 Cluster: Chromos... 68 2e-10
gnl|LJGI|TC61026 similar to UniRef100_A7Q8K8 Cluster: Chromosome... 68 2e-10
>gnl|LJGI|TC79232 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 1330
Score = 2545 bits (1284), Expect = 0.0
Identities = 1306/1312 (99%), Gaps = 1/1312 (0%)
Strand = Plus / Plus
Query: 109 gaggctctgcttcagaagtgccaataccatgttactgcgactaaacacgcaccgacggcg 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggctctgcttcagaagtgccaataccatgttactgcgactaaacacgcaccgacggcg 60
Query: 169 ctgcagttgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatg 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcagttgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatg 120
Query: 229 ccagacatggatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccagacatggatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtc 180
Query: 289 ataatgttgtctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgct 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataatgttgtctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgct 240
Query: 349 tgtgattatctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtg 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgattatctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtg 300
Query: 409 gtcaggaagaagaagaagactgtcccgaaggaagggaccaaaaccggcaaccaagacact 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcaggaagaagaagaagactgtcccgaaggaagggaccaaaaccggcaaccaagacact 360
Query: 469 cctatttctcatagtgacaacggtcaagggtcggcagcgacaacaaattccgatcaaaat 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctatttctcatagtgacaacggtcaagggtcggcagcgacaacaaattccgatcaaaat 420
Query: 529 ggaaaatcatccaagaaaaggaaggacctggaggaagatgatgataatgaggtgcatgag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaaaatcatccaagaaaaggaaggacctggaggaagatgatgataatgaggtgcatgag 480
Query: 589 aatggtgacgacagtgatgacccatcagctcagaggaagcctcgagttgtttggtcggtt 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatggtgacgacagtgatgacccatcagctcagaggaagcctcgagttgtttggtcggtt 540
Query: 649 gacctgcaccgcaagtttgttgctgccgtcaatcagttaggcctggataaggctgtacct 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacctgcaccgcaagtttgttgctgccgtcaatcagttaggcctggataaggctgtacct 600
Query: 709 aaaagaattcttgaaatgatgaatgttgatcagcttacaagggagaatgttgccagccat 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaagaattcttgaaatgatgaatgttgatcagcttacaagggagaatgttgccagccat 660
Query: 769 cttcagaaatatagactttatctgaagagacttagctgtgtggaaaaccaacaagctaat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttcagaaatatagactttatctgaagagacttagctgtgtggaaaaccaacaagctaat 720
Query: 829 atggtggcagccttaggcagtgcagatctgtcctaccaacaagctcatatggtagcagcc 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 721 atggtggcagccttaggcagtgcagatctgtcctaccaacaagctcatatggtagtagcc 780
Query: 889 ttaggcagtgcagatccatcctatttgagaacgggttcgctgagtgcgcacggacatttg 948
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 781 ttaggcagtgcagatccatcctatttgagaacgggttctctgagtgcgctcggacatttg 840
Query: 949 cggacattgaacgcatctcgacagtctcacaacaatgctttcagatccttcacacatgat 1008
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 841 cggacattgaacgcatctcgacagtttcacaacaatgctttcagatccttcacacatgat 900
Query: 1009 gggatggttagtagaatgaaccctccttctagtatgaatgtgcaagggttgccttcttcg 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gggatggttagtagaatgaaccctccttctagtatgaatgtgcaagggttgccttcttcg 960
Query: 1069 ggaactcttcaggtgattcaggcacaaaatttaaacaattccatgaatggcagccaactt 1128
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 961 ggaactcttcaggtgattcaggcacaaaatttaaacaattccgtgaatggcagccaactt 1020
Query: 1129 aagttccattcagctctcattggtgggaatcagaatgatcaattgcaacacaacaagggt 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aagttccattcagctctcattggtgggaatcagaatgatcaattgcaacacaacaagggt 1080
Query: 1189 gttagtcatattcaaaacctgaacactaattttaatgctaaacccacttttcccatcacc 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gttagtcatattcaaaacctgaacactaattttaatgctaaacccacttttcccatcacc 1140
Query: 1249 aatcaaagacaaggtgggttgagtatctcaaacaacgccttgatgttagaaatgaatcct 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aatcaaagacaaggtgggttgagtatctcaaacaacgccttgatgttagaaatgaatcct 1200
Query: 1309 caacacaaattaatgggaggagtttctacttcattagccccacaacaacattcacaattc 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caacacaaattaatgggaggagtttctacttcattagccccacaacaacattcacaattc 1260
Query: 1369 tctctccctttgatggataatggaaggttgaatgatggttggcccagtgttt 1420
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1261 tctctccctttgatggataatggaa-gttgaatgatggttggcccagtgttt 1311
>gnl|LJGI|TC73842 weakly similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 694
Score = 739 bits (373), Expect = 0.0
Identities = 373/373 (100%)
Strand = Plus / Plus
Query: 1577 ggcaaataagcaatagtgtttcattgcaagggtggaataatcataataatctgagtggcg 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaaataagcaatagtgtttcattgcaagggtggaataatcataataatctgagtggcg 60
Query: 1637 gttacaattctcatgttattggtaactcaataggctctacgattcccccgaatggtggtg 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacaattctcatgttattggtaactcaataggctctacgattcccccgaatggtggtg 120
Query: 1697 ttccagacggcaatgcttcgatgaactcaaccttcaattttggtgatcccttacaaatga 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttccagacggcaatgcttcgatgaactcaaccttcaattttggtgatcccttacaaatga 180
Query: 1757 agcatgatgggatcattgaattacctggagagccctcattgataccacatcagcaggtac 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcatgatgggatcattgaattacctggagagccctcattgataccacatcagcaggtac 240
Query: 1817 atgtaatgaaccagcagaagcctcgtcacagccgcttctcgaatagtgtgggttccctgg 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtaatgaaccagcagaagcctcgtcacagccgcttctcgaatagtgtgggttccctgg 300
Query: 1877 aagaattggccagtgcaatgatgatgaaacagaatcacgacatgtatggattccgccgcg 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaattggccagtgcaatgatgatgaaacagaatcacgacatgtatggattccgccgcg 360
Query: 1937 ataacaatcattc 1949
|||||||||||||
Sbjct: 361 ataacaatcattc 373
>gnl|LJGI|TC61737 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 819
Score = 230 bits (116), Expect = 3e-59
Identities = 215/248 (86%)
Strand = Plus / Plus
Query: 176 tgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatgccagaca 235
|||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 313 tgttgagagaaaacaaaggccagtttgacctggtaatcagtgatgtgcacatgccagaca 372
Query: 236 tggatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtcataatgt 295
|||||||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||||
Sbjct: 373 tggatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgc 432
Query: 296 tgtctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgcttgtgatt 355
| |||| ||||| || | ||| ||||| ||||||| ||| |||| || || || ||||
Sbjct: 433 tttctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgatt 492
Query: 356 atctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtggtcagga 415
|||||||||| ||||| ||| | ||||||||| ||||||||||||||||||| ||||||
Sbjct: 493 atctgctgaagcctgtgagaatggaggagctaaagaacatttggcagcatgtgatcagga 552
Query: 416 agaagaag 423
|||||||
Sbjct: 553 ggaagaag 560
Score = 75.8 bits (38), Expect = 9e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 624 gaagcctcgagttgtttggtcggttgacctgcaccgcaagtttgttgctgccgtcaatca 683
||||||||| ||||||||||| || || |||||| ||||||| |||||||| || |||||
Sbjct: 710 gaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgttaatca 769
Query: 684 gttaggcctggataaggctgtacctaaaagaattcttgaaatgatgaatg 733
| ||||| | || |||||||| ||||||| ||||||| |||||||||
Sbjct: 770 gctaggcattgacaaggctgtgcctaaaaaggttcttgatttgatgaatg 819
>gnl|LJGI|TC57954 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 893
Score = 230 bits (116), Expect = 3e-59
Identities = 215/248 (86%)
Strand = Plus / Plus
Query: 176 tgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatgccagaca 235
|||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 339 tgttgagagaaaacaaaggccagtttgacctggtaatcagtgatgtgcacatgccagaca 398
Query: 236 tggatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtcataatgt 295
|||||||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||||
Sbjct: 399 tggatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgc 458
Query: 296 tgtctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgcttgtgatt 355
| |||| ||||| || | ||| ||||| ||||||| ||| |||| || || || ||||
Sbjct: 459 tttctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgatt 518
Query: 356 atctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtggtcagga 415
|||||||||| ||||| ||| | ||||||||| ||||||||||||||||||| ||||||
Sbjct: 519 atctgctgaagcctgtgagaatggaggagctaaagaacatttggcagcatgtgatcagga 578
Query: 416 agaagaag 423
|||||||
Sbjct: 579 ggaagaag 586
Score = 131 bits (66), Expect = 2e-29
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 624 gaagcctcgagttgtttggtcggttgacctgcaccgcaagtttgttgctgccgtcaatca 683
||||||||| ||||||||||| || || |||||| ||||||| |||||||| || |||||
Sbjct: 736 gaagcctcgggttgtttggtctgtggagctgcacggcaagttcgttgctgctgttaatca 795
Query: 684 gttaggcctggataaggctgtacctaaaagaattcttgaaatgatgaatgttgatcagct 743
| ||||| | || |||||||| ||||||| ||||||| ||||||||||||| ||||
Sbjct: 796 gctaggcattgacaaggctgtgcctaaaaaggttcttgatttgatgaatgttgaaaagct 855
Query: 744 tacaagggagaatgttgccagccatcttcagaaatata 781
||||||||||||||| ||||||||| | ||||||||||
Sbjct: 856 tacaagggagaatgtggccagccatttacagaaatata 893
>gnl|LJGI|FS323053 similar to UniRef100_A7P5Y3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 672
Score = 208 bits (105), Expect = 1e-52
Identities = 201/233 (86%)
Strand = Plus / Plus
Query: 176 tgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatgccagaca 235
|||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 439 tgttgagagaaaacaaaggccagtttgacctggtaatcagtgatgtgcacatgccagaca 498
Query: 236 tggatggattcaagcttcttgagcttgtggggcttgagatggacctacctgtcataatgt 295
|||||||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||||
Sbjct: 499 tggatggatttaagcttcttgaacttgttggacttgaaatggaccttcctgtcataatgc 558
Query: 296 tgtctgtcaatggcgacccgaagatggtgttgaagggaattactcatggcgcttgtgatt 355
| |||| ||||| || | ||| ||||| ||||||| ||| |||| || || || ||||
Sbjct: 559 tttctgcaaatggggatacaaagttggtgatgaaggggatttctcacggggcctgcgatt 618
Query: 356 atctgctgaaacctgttagagttgaggagctacggaacatttggcagcatgtg 408
|||||||| | ||||| ||| | ||||||||| |||||||||||||||||||
Sbjct: 619 atctgctggagcctgtgagaatggaggagctaaagaacatttggcagcatgtg 671
>gnl|LJGI|TC80401 similar to UniRef100_A7R0P8 Cluster: Chromosome undetermined
scaffold_314, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_314,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 715
Score = 79.8 bits (40), Expect = 6e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 176 tgttgagagaaaacaaagacaagtttgacctggtaatcagtgatgtccacatgccagaca 235
||||||| ||||||| | | ||||||||||| || ||||||||||| | ||||| ||||
Sbjct: 483 tgttgagggaaaacagaaataagtttgacctagttatcagtgatgtgaatatgcctgaca 542
Query: 236 tggatggattcaagcttcttgagcttgtggggcttgagatggac 279
|||||||||| ||||| |||||| | ||||| ||||| ||||||
Sbjct: 543 tggatggatttaagctccttgagttggtgggacttgaaatggac 586
>gnl|LJGI|DC593459 homologue to UniRef100_A7Q8K8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 584
Score = 67.9 bits (34), Expect = 2e-10
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 214 agtgatgtccacatgccagacatggatggattcaagcttcttgagc 259
|||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 512 agtgatgtgcacatgccagacatggatggatttaagcttctagagc 557
>gnl|LJGI|TC61026 similar to UniRef100_A7Q8K8 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1202
Score = 67.9 bits (34), Expect = 2e-10
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 214 agtgatgtccacatgccagacatggatggattcaagcttcttgagc 259
|||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 435 agtgatgtgcacatgccagacatggatggatttaagcttctagagc 480