Miyakogusa Predicted Gene
- Lj5g3v0511000.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0511000.2 tr|D7MP20|D7MP20_ARALL Binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494201
PE=4,44.72,3e-18,SUBFAMILY NOT NAMED,NULL; ANDROGEN INDUCED INHIBITOR
OF PROLIFERATION (AS3) / PDS5-RELATED,NULL; seg,CUFF.53762.2
(2388 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68022 weakly similar to UniRef100_A7P5X1 Cluster: Chr... 1691 0.0
gnl|LJGI|GO009929 similar to UniRef100_A7P5X1 Cluster: Chromosom... 1374 0.0
gnl|LJGI|TC71748 212 8e-54
gnl|LJGI|BW627902 weakly similar to UniRef100_A7P5X1 Cluster: Ch... 135 1e-30
gnl|LJGI|TC76146 weakly similar to UniRef100_A7P5X1 Cluster: Chr... 56 1e-06
>gnl|LJGI|TC68022 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 908
Score = 1691 bits (853), Expect = 0.0
Identities = 891/907 (98%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1298 caagtgagaggacccatgatgatgaaagccgttcaaagaaacgtggacgcacgaaaaaga 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caagtgagaggacccatgatgatgaaagccgttcaaagaaacgtggacgcacgaaaaaga 61
Query: 1358 aagatagctcggcaaaagaagtggctgcggaagatgtttcgcaaaaggtgtctgaaggaa 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagatagctcggcaaaagaagtggctgcggaagatgtttcgcaaaaggtgtctgaaggaa 121
Query: 1418 catgtgattcagaagcaaaaccaactaggccatcagcaaaaaagggacttggacgtggct 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 catgtgattcagaagcaaaaccaactaggccatcagcaaaaaagggacttggacgtggct 181
Query: 1478 ctgatgtcaaaataactactgtcgtagatgcagtnnnnnnnggtagtgggtcaaatgatt 1537
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 182 ctgatgtcaaaataactactgtcgtagatgcagtaaaaaaaggtagtgggtcaaatgatt 241
Query: 1538 tagatgtgaaaaaacaatctgctnnnnnnncagaagaaagaaacaagggtagtggtgggt 1597
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 242 tagatgtgaaaaaacaatctgctaaaaaaacagaagaaagaaacaagggtagtggtgggt 301
Query: 1598 catccttgaggctgtcagaggacaagaaacggagtggacgggggaaaggtaaccctgaaa 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catccttgaggctgtcagaggacaagaaacggagtggacgggggaaaggtaaccctgaaa 361
Query: 1658 aagctcttgcaaaatcttccgctaaagatgaggatgaggaaatggtgtctttgcaaaagt 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagctcttgcaaaatcttccgctaaagatgaggatgaggaaatggtgtctttgcaaaagt 421
Query: 1718 cagctatgaaatcaaccaaagaacatttggaggagacacctaagacaaatttgaagagga 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cagctatgaaatcaaccaaagaacatttggaggagacacctaagacaaatttgaagagga 481
Query: 1778 aacgtactccaggaaaagaaaatgaatctgataacaagaaatatggtgacgagcttgttg 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aacgtactccaggaaaagaaaatgaatctgataacaagaaatatggtgacgagcttgttg 541
Query: 1838 gaacccgtgttaaggtttggtggccagaggataaagagttttatgaaggtattgtcgatt 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaacccgtgttaaggtttggtggccagaggataaagagttttatgaaggtattgtcgatt 601
Query: 1898 cttttgattcttccagtaagaagcacaa-ggtcttgtatgatgatggtgatcaggaaaca 1956
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 602 cttttgattcttccagtaagaagcacaagggtcttgtatgatgatggtgatcaggaaaca 661
Query: 1957 ttaaatcttaaaaaggaaaaatggagtattattcaagatgatgctgattcagatgaggaa 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttaaatcttaaaaaggaaaaatggagtattattcaagatgatgctgattcagatgaggaa 721
Query: 2017 gaagcaagaggtggtaccagtcatgatgatgcttccgctgatatgccacccacaaagaaa 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaagcaagaggtggtaccagtcatgatgatgcttccgctgatatgccacccacaaagaaa 781
Query: 2077 gggaagacaagtgctggtgaaaccaaaaaggaaggaaagagggattctgcttctaaaagc 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gggaagacaagtgctggtgaaaccaaaaaggaaggaaagagggattctgcttctaaaagc 841
Query: 2137 ggaggagccacatcaagtaaatcaaaaggggcatccatgaagtctagccataagtcaaag 2196
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 842 ggaggagccacatcaagtaaatcagaaggggcatccatgaagtctagccataagtcaaag 901
Query: 2197 ccggttg 2203
|||||||
Sbjct: 902 ccggttg 908
>gnl|LJGI|GO009929 similar to UniRef100_A7P5X1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 793
Score = 1374 bits (693), Expect = 0.0
Identities = 739/748 (98%), Gaps = 6/748 (0%)
Strand = Plus / Plus
Query: 232 gcagttgcctcgtgcatcagtgagataacaagaatcactgcacctgatgctccttacgat 291
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2 gcagttgcctcgtgcatcagtgagatgacaagaatcactgcacctgatgctccttacgat 61
Query: 292 gatgaccaaatgaaggcggtcttccggttaattgtatcttcatttgaaaatctatatgat 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatgaccaaatgaaggcggtcttccggttaattgtatcttcatttgaaaatctatatgat 121
Query: 352 gattcaagccggtcatgtgcaaaaaggacttcgattcttgacacagttgcaaaagtcagg 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gattcaagccggtcatgtgcaaaaaggacttcgattcttgacacagttgcaaaagtcagg 181
Query: 412 tcatgtgtggtaatgctggatcttgaatgtgatgccctaatttcagagatgtttcagcat 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcatgtgtggtaatgctggatcttgaatgtgatgccctaatttcagagatgtttcagcat 241
Query: 472 ttcttcaagacaataagggagcatcattcggggagtgtttttgcatccatggaaaccata 531
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcttcaagacaataagggagcatcgttcggggagtgtttttgcatccatggaaaccata 301
Query: 532 atgaaccttgttctagaggaaagtgaagatatatcgttggacttgctctgtccaatcata 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgaaccttgttctagaggaaagtgaagatatatcgttggacttgctctgtccaatcata 361
Query: 592 gacagtgtaaagaaagacaatgaggaagttttgccaattgctcgaaggttgggggagaaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gacagtgtaaagaaagacaatgaggaagttttgccaattgctcgaaggttgggggagaaa 421
Query: 652 gttcttgaaagttctgcaaccagacttaaaccctatttagtgcaagcagttgatgccttg 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttcttgaaagttctgcaaccagacttaaaccctatttagtgcaagcagttgatgccttg 481
Query: 712 ggtctttctttggatgattatgatgatgttcttgcctcaatatgccaagatacatctggt 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggtctttctttggatgattatgatgatgttcttgcctcaatatgccaagatacatctggt 541
Query: 772 aacctggaccaaaatgatgttacagagaattcaaaagaagctgaacaacctcaacaagat 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aacctggaccaaaatgatgttacagagaattcaaaagaagctgaacaacctcaacaagat 601
Query: 832 gatcctgttggtgacaggtctcctaagtcagtcatgagtaatggcattgcacaggctgga 891
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 602 gatcctgttggtgacaggtctcctaagtcagtcatgagtaatggcattgcaca-gctgga 660
Query: 892 gaagatgatgctttggtagattccaagtccctattgaagccagatgatactgattattct 951
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 g-agatgatgctttggtagattccaagtccctattgaag-cagatgatactgattattct 718
Query: 952 gttcagtccaaaggtgataatttatcag 979
| |||||| || |||||||||||||||
Sbjct: 719 g-tcagtc--aaagtgataatttatcag 743
>gnl|LJGI|TC71748
Length = 774
Score = 212 bits (107), Expect = 8e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 2282 aaaaaagcaaatccaagaacaccgacagttccaagataagcagatcaaaagatgacgtta 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaaagcaaatccaagaacaccgacagttccaagataagcagatcaaaagatgacgtta 60
Query: 2342 gcacaccaaaatctgccaagtctaagcatgaaactccgaagactgga 2388
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcacaccaaaatctgccaagtctaagcatgaaactccgaagactgga 107
>gnl|LJGI|BW627902 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 489
Score = 135 bits (68), Expect = 1e-30
Identities = 164/196 (83%)
Strand = Plus / Plus
Query: 1771 aagaggaaacgtactccaggaaaagaaaatgaatctgataacaagaaatatggtgacgag 1830
||||||||||||||||||||||||||||| || ||||||| |||||||||||||| |
Sbjct: 289 aagaggaaacgtactccaggaaaagaaaaagagtctgatacaaagaaatatggtgaaaac 348
Query: 1831 cttgttggaacccgtgttaaggtttggtggccagaggataaagagttttatgaaggtatt 1890
|||||||| || ||||| ||||||||||| |||||| |||||||| ||| |
Sbjct: 349 cttgttggtttacgggttaaagtttggtggcctgaggatcgtgagttttacacgggtgtc 408
Query: 1891 gtcgattcttttgattcttccagtaagaagcacaaggtcttgtatgatgatggtgatcag 1950
|| |||| |||||||| |||| |||||||||||||| |||||||||||||||||| |
Sbjct: 409 gttaattcatttgattccgccagaaagaagcacaaggtgttgtatgatgatggtgatgaa 468
Query: 1951 gaaacattaaatctta 1966
||||||||||||||||
Sbjct: 469 gaaacattaaatctta 484
>gnl|LJGI|TC76146 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 1164
Score = 56.0 bits (28), Expect = 1e-06
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 236 ttgcctcgtgcatcagtgagataacaagaatcactgcacctgatgctccttacgatgatg 295
||||||| ||||||||||| | | |||||| || || |||||| ||||||| || ||||
Sbjct: 347 ttgcctcttgcatcagtgaacttataagaataacggcccctgatcctccttatgaagatg 406
Query: 296 accaaatgaagg 307
||||||||||||
Sbjct: 407 accaaatgaagg 418