Miyakogusa Predicted Gene

Lj5g3v0510910.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0510910.1 tr|O81977|O81977_SOYBN Rudimentary enhancer
(Fragment) OS=Glycine max PE=2 SV=1,87.1,0.0000007,ERH-like,NULL;
ER,Enhancer of
rudimentary,gene.Ljchr5_pseudomol_20120830.path1.gene1014.1
         (105 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62902 homologue to UniRef100_O81977 Cluster: Rudiment...   198   4e-51

>gnl|LJGI|TC62902 homologue to UniRef100_O81977 Cluster: Rudimentary enhancer; n=1;
           Glycine max|Rep: Rudimentary enhancer - Glycine max
           (Soybean), partial (80%)
          Length = 728

 Score =  198 bits (100), Expect = 4e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaataatcggcacacaattattctaatgcaaacctctcacaacagagcaaccaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggctaataatcggcacacaattattctaatgcaaacctctcacaacagagcaaccaga 119

                                                   
Query: 61  actttcatggattatgcttcaataacacaggccatggaag 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 actttcatggattatgcttcaataacacaggccatggaag 159