Miyakogusa Predicted Gene

Lj5g3v0473750.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0473750.1 tr|A9SQU0|A9SQU0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,50,6e-17,coiled-coil,NULL,CUFF.53061.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71749 similar to UniRef100_A7P674 Cluster: Chromosome...   896   0.0  

>gnl|LJGI|TC71749 similar to UniRef100_A7P674 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (92%)
          Length = 823

 Score =  896 bits (452), Expect = 0.0
 Identities = 459/460 (99%), Gaps = 1/460 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggtatgaatacaatcaagccacagacgggcttatgaagctattcacaaaagccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  atggggtatgaatacaatcaagccacagacgggcttatgaagctattcacaaaagccaat 118

                                                                       
Query: 61  cacgatctcgctatggttcaccacc-gtctcgaaaaggagtttcaacaggtttaccctga 119
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 119 cacgatctcgctatggttcaccacccgtctcgaaaaggagtttcaacaggtttaccctga 178

                                                                       
Query: 120 caacgcaaaccctatgaagctggtttcaaggatcaaaaaggtgcaggaagatatatcaac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 caacgcaaaccctatgaagctggtttcaaggatcaaaaaggtgcaggaagatatatcaac 238

                                                                       
Query: 180 cttgaagggacagtgccatgagcttctggctgcaaagcaggatttgatagataaggctca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cttgaagggacagtgccatgagcttctggctgcaaagcaggatttgatagataaggctca 298

                                                                       
Query: 240 gataactctggttgagaacagaaattcgctgcagcgtatgcaagcatctgtgggcatccc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gataactctggttgagaacagaaattcgctgcagcgtatgcaagcatctgtgggcatccc 358

                                                                       
Query: 300 tgtaactggtgaagatgatgctgcattcactaacttcaaacaggtaattgaagaatggac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgtaactggtgaagatgatgctgcattcactaacttcaaacaggtaattgaagaatggac 418

                                                                       
Query: 360 agctcaagtaagatccaaaacaggagatgaaacacatgattctgattctggagatatcaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agctcaagtaagatccaaaacaggagatgaaacacatgattctgattctggagatatcaa 478

                                                   
Query: 420 caaactgctcttctcagccatagttcaaagtaattgaaga 459
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 caaactgctcttctcagccatagttcaaagtaattgaaga 518